Oryza sativa japonica (Japanese rice) (RAPDB): Os02t0746000-01
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Entry
Os02t0746000-01 CDS
T02163
Symbol
Os02g0746000
Name
(RAP-DB) Similar to Cullin-3 (CUL-3). Splice isoform 3.
KO
K03869
cullin 3
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
Os02t0746000-01 (Os02g0746000)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dosa04121
]
Os02t0746000-01 (Os02g0746000)
03400 DNA repair and recombination proteins [BR:
dosa03400
]
Os02t0746000-01 (Os02g0746000)
Ubiquitin system [BR:
dosa04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul3 complex
Cullin
Os02t0746000-01 (Os02g0746000)
DNA repair and recombination proteins [BR:
dosa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
Os02t0746000-01 (Os02g0746000)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
WAC_Acf1_DNA_bd
Glyco_hydro_68
Motif
Other DBs
RAP-DB:
Os02t0746000-01
LinkDB
All DBs
Position
chr02:complement(join(31312522..31312691,31309980..31312020))
AA seq
736 aa
AA seq
DB search
MSGGGPPKKRNFKIELFKHRVELDPKYAERTWKVLEHAIHEIYNHNASGLSFEELYRSAY
NMVLHKYGEKLYDGLERTMTWRLKEISKSIEAAQGGLFLEELNAKWMDHNKALQMIRDIL
MYMDRTYVPQSRRTPVHELGLNLWRDHIIHSPMIHSRLLDTLLDLIHRERMGEMINRGLM
RSITKMLMDLGAAVYQDDFEKPFLDVTASFYSGESQEFIECCDCGNYLKKSERRLNEEME
RVSHYLDSGTEAKITSVVEKEMIANHMHRLVHMENSGLVNMLVDDKYDDLARMYNLFRRV
FDGLSTIRDVMTSYLRETGKQLVTDPERLKDPVEFVQRLLNEKDKHDKIINVAFGNDKTF
QNALNSSFEYFINLNNRSPEFISLYVDDKLRKGLKGATEEDVEVILDKVMMLFRYLQEKD
VFEKYYKQHLAKRLLSGKTVSDDAERSMIVKLKTECGYQFTSKLEGMFTDMKTSQDTMID
FYAKKSEELGDGPTLDVHILTTGSWPTQPCPPCNLPTEILAICDKFRTYYLGTHSGRRLT
WQTNMGTADIKATFGKGQKHELNVSTYQMCVLMLFNSTDGLTYKDIEQDTAIPASDLKRC
LQSLACVKGKNVLRKEPMSKDISEDDTFYFNDKFTSKLVKVKIGTVVAQKESEPEKQETR
QRVEEDRKPQIEAAIVRIMKSRRVLDHNSIVAEVTKQLQARFMPNPVVIKKRIESLIERE
FLERDKADRKLYRYLA
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggggcgggccgccgaagaaacgcaacttcaagatcgagctgttcaagcaccgc
gtggagctcgaccccaagtacgcggagcggacatggaaggtcctggagcacgccatccac
gagatctacaaccacaacgccagtggcctctccttcgaggagctctacaggagtgcctac
aacatggtgctccacaagtatggtgagaagctatatgatggcctggagagaactatgaca
tggcgcttgaaggaaatatcaaaatcaatagaggctgcacagggtggtttgtttctggag
gagctgaatgccaagtggatggatcacaataaggcattgcagatgatccgagatattcta
atgtacatggatcgaacatatgtcccgcaatcccgtagaacacctgttcatgagcttggt
ttgaatttgtggagggatcacataattcactctcccatgattcatagtcggctgcttgat
acccttctggatcttattcacagggagagaatgggtgaaatgattaacagaggcctgatg
aggagcataacgaaaatgttaatggatcttggtgctgctgtatatcaagatgactttgag
aagccgtttttggatgttacagctagcttctacagtggagagtctcaggagttcattgag
tgctgtgactgtgggaactatcttaagaagtccgagagacgtctcaatgaggaaatggaa
cgtgtctcacactacttggattctggcactgaggcaaagataactagtgtggttgagaaa
gaaatgattgccaatcacatgcatagattggttcatatggaaaactcaggccttgtaaat
atgcttgtagatgacaaatatgacgacttggctaggatgtacaacttattccgaagggtt
tttgatgggctatcgacaatcagagatgtgatgacttcatacctaagggaaacagggaag
cagttagtgacagatcctgagaggttgaaagacccagtggaatttgttcagcgcttgtta
aatgagaaggacaagcatgataagatcatcaacgttgcttttggcaatgacaaaactttc
cagaatgctctaaattcatcctttgagtacttcatcaacttaaacaacaggtcacctgaa
ttcatatcgttgtatgttgatgataaacttcggaaaggattgaaaggagccacagaagag
gatgtggaggttattctggacaaagtcatgatgctgtttcggtacctccaggagaaggat
gtatttgagaagtactacaagcagcatttggcgaaaagactattgtctggcaaaactgtt
tctgatgatgctgagaggagtatgatagttaaactcaagacagaatgtgggtaccagttc
acttccaaattagagggcatgttcactgacatgaagacctctcaggacactatgatagac
ttttatgccaagaagtctgaggaacttggcgatggcccaacacttgatgtccacattctt
acaactggttcttggccaacacagccctgccctccctgcaaccttccaactgaaatcctt
gcaatatgtgataagttccggacatactaccttggaactcacagtggccggagattgaca
tggcaaacaaacatgggaacagctgacataaaagccacatttgggaaaggtcagaagcat
gaactaaatgtatccacttatcagatgtgtgttctcatgctgtttaattctaccgatggg
ttaacctacaaagacatcgaacaagatactgcgatacctgcctcggatctaaagagatgc
cttcaatctcttgcttgtgtcaaggggaagaatgttctccgcaaggaacccatgagcaaa
gatatatcggaggatgacacattctacttcaacgacaagttcacaagcaagcttgttaag
gtcaagattgggacagtagtggcgcaaaaggaatctgagccagagaaacaagagactcgt
caacgggttgaggaggacaggaaacctcaaattgaggctgctatcgtcaggattatgaaa
tccaggagggtcttggatcataacagcattgtagctgaggttaccaagcaattgcaagcc
cgattcatgccgaatcctgttgtcataaagaaacgcatagaatctctaattgagcgtgaa
ttcttagagagggacaaagcagataggaagttatatcgctatcttgcatag
DBGET
integrated database retrieval system
