Oryza sativa japonica (Japanese rice) (RAPDB): Os05t0551900-00
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Entry
Os05t0551900-00 CDS
T02163
Symbol
Os05g0551900
Name
(RAP-DB) Similar to EMB1865 (embryo defective 1865); RNA binding.
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CRS1_YhbY
PTRF_SDPR
Motif
Other DBs
RAP-DB:
Os05t0551900-00
LinkDB
All DBs
Position
chr05:complement(join(27445141..27445887,27444443..27444920,27444214..27444344,27443241..27443585,27442925..27443081,27442555..27442847,27442380..27442439,27441786..27441923))
AA seq
782 aa
AA seq
DB search
MALSELPLHHSFRLSSRPHLRLLPLRLLSSRHASSSSSTTAAASSSSSSGGNRAPPAPNP
TRGAPWLQKWGPTDPAAPPPPPPAPSPTSSIDRIVHRLRNLGLASDDDEPTAAAATATAP
PDGNERLSDLLDRSWARPDQQFAASSFDESVLPWERDEVARGRENEEDGVKRRRVRAPSL
AELTIEDEELRRLRRLGMTLRDRITVPKAGVTQAVTEKIHDAWRKSELVRLKFHEDLAHD
MKTAHELVERRTGGLIIWRSGSVMVVYRGSNYKRPLKSETLDGNSSAVKGADGTLFIPDA
SSPTEHDSQGKDVNTQREIAARLNMQNTEDMTEEELEFNQMLDELGPRFVDWWGTGILPV
DADLLPQTIPGYKTPFRLLPTGMRLTLTNAELTNLRKLARDLPCHFALGRNRNHQGLAAA
IVKLWEKSLVVKIAVKRGIQNTNNKLMSEEIKNLTGGTLLLRNKYYIVIYRGKDFLPTSV
AAALAEREELTKDIQNVEEQKRCIPVVHSMDDSLDGHALAGTLAEFQEAQARWGREVTAK
EQEEMKEASSRSVKEKLFKRLEHKLSIAQAKIHRAERLLSKIEASMVLANPSDDKEMITD
EERSVFRRIGLRLKAYLPVGIRGVFDGVIENMHLHWKHREVVKLITKQKTLPFVEETARL
LEYESGGILVAIERVTKGYALIFYRGKNYRRPINIRPRNLLTKAKALKRAVAMQRHEALS
QHIAELENNIRQMKLDLGIEVDEEYEEDGSDSENENNEAVSSARYDEVSNLLKLMLSVLE
PP
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggcgctctccgagctcccgctccaccactccttccgcctctcctcccgcccccacctc
cgcctcctcccgctccgccttctctcctcccgccacgcctcctcctcctcctccaccacc
gccgccgcgtcctcctcctcctcctccggcggcaaccgcgcccctccggctccaaatcca
acccgaggcgcgccgtggctgcagaagtgggggcccaccgaccccgccgcgccgccgcca
ccacctccggctccctccccgacctcctccatcgaccgaatcgtccaccgcctccgcaac
ctcggcctcgccagcgacgacgacgagcccaccgccgccgccgccacggccaccgcgcct
cccgacggcaacgagcgcctcagcgacctgctcgaccgcagctgggcgcgccccgaccag
cagttcgccgcctccagcttcgacgagtccgtcctcccctgggagagggatgaggtcgcg
cgaggaagagagaacgaggaggacggggtgaagaggaggagggttagggcgccctcgctg
gccgagctcacgatcgaggacgaggagctgcgtcgcctccggcggctggggatgactctt
cgggaccgcatcaccgtgcccaaggcgggcgtcacgcaagccgtcacggagaagatccac
gacgcctggaggaaatcagagttggtccggctcaagttccacgaggacctcgcgcacgac
atgaaaactgctcatgagctagtcgagcgacggacaggaggattgatcatatggaggtct
gggagtgttatggtggtttacagagggagcaattacaaaaggcctttgaaatctgaaaca
ttggatggtaactcatcagcggtgaaaggggcagacggtacattgttcatcccggatgca
tcaagccccacagagcatgatagccaggggaaggatgtaaacacccaacgtgagattgca
gccagattaaatatgcagaatactgaggacatgactgaagaggagctggagttcaatcaa
atgcttgatgagttgggccctcgttttgtggattggtggggaacaggcattttacctgtg
gatgccgacttgttgcctcaaacaattcctggttataaaacaccatttagacttcttcca
actggaatgcgtttgaccctaaccaatgcagagctgactaatttgcggaagttagcaagg
gatcttccatgccattttgctctagggagaaaccggaatcatcaaggccttgcagcagct
attgttaagctctgggagaagagtttggtggtgaaaatagctgtgaaacgtggaatccag
aatacaaacaacaagctaatgtcagaagaaataaagaatctaacagggggcaccttgctt
cttcgaaataagtactacattgtaatatatcgtggaaaagacttccttccaacatctgtt
gcagctgctttggctgaaagagaggagttgacaaaagatatccagaatgtagaggagcag
aaaagatgcattccggttgtgcactcaatggatgacagtttagatgggcatgctcttgcg
ggtactcttgctgaatttcaggaggctcaagctcgttggggaagggaagtaactgctaag
gagcaagaagaaatgaaagaagcatcttctagatcagtgaaggaaaagcttttcaagaga
ctagagcacaaactttccattgcacaggcaaaaatacatagagcagagcggttactatca
aagatagaagcttctatggtccttgctaatccatctgatgataaagaaatgattacagat
gaggaaagatctgttttccgtagaatcggtttgcgtcttaaggcatacttgcctgttgga
attcgtggtgtctttgatggcgtcattgaaaatatgcacttgcattggaagcacagggaa
gttgtcaaattgataacaaagcagaagactctgccctttgttgaggagacggcacggctt
ctagagtatgagagtggcggtatactagtcgccattgaaagagttacaaagggctatgca
cttatattttaccgtggaaagaattataggaggcctattaacataaggcctaggaatctt
ttaacaaaagcaaaggcattgaagcgtgctgttgcaatgcagcgtcatgaggccctcagt
cagcatatagctgaactggaaaacaatataaggcagatgaagttggatttgggcattgag
gttgatgaggaatatgaagaggacggttcagattcagaaaatgagaataatgaagcagtt
tcctctgcaagatacgacgaggtatccaatcttttgaaactgatgctgtctgttttagaa
ccaccataa
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