KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os05t0588700-01
Entry
Os05t0588700-01   CDS       T02163                                 
Symbol
Os05g0588700
Name
(RAP-DB) Paired amphipathic helix domain containing protein.
  KO
K11644  paired amphipathic helix protein Sin3a
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dosa03036]
    Os05t0588700-01 (Os05g0588700)
Chromosome and associated proteins [BR:dosa03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     Os05t0588700-01 (Os05g0588700)
    REST complex
     Os05t0588700-01 (Os05g0588700)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    Os05t0588700-01 (Os05g0588700)
SSDB
Motif
Pfam: Sin3_corepress Sin3a_C PAH
Other DBs
RAP-DB: Os05t0588700-01
LinkDB
Position
chr05:complement(join(29324295..29324467,29324061..29324214,29323865..29323966,29323665..29323793,29323271..29323466,29321141..29321295,29320913..29321064,29320690..29320796,29320336..29320596,29319930..29320228,29319347..29319658,29318974..29319044,29318729..29318867,29318461..29318613,29318091..29318191,29317942..29318014))
AA seq 858 aa
MDSSAGDPGDGVPSKRARTERDPYRVETMEFLVLVKSELPDDVYSHFVRSMIKIRRQRNM
SIEKCKEIILEILDGQPEAIQVFEHFIQGYSPCRAKMRSKAHNFVERVKACPDISREDFH
ALLNVLAKYYKNEIKTSEEVLEKVERIIGNYPEFLEEFKIFVPHHLRAHLPNEKSCTSPK
SSRVSETFVSFTLDAMNKLDGLRVKATNGRNQATPLKYTQDQNQNHEGRGYSLRHKQTKR
TTGLIENPRKQGDDKSPHAEDDEEHKAEPLLQWSTSRENELPLKVDPSNCKHCTPSYCLL
PKNCVTLQSSYQTELGRSILNDSLVSVTSGREDCYKFRTKNQYEENMFKCEDDLFESDML
LQRFRATADFIEDLQYRFGSNVKIQEHLTPLHKRCIEQLYDDSGIDMLDALSESENTSSA
LAVILSRLNQKIGDFSEARLSLNKMCPDTVANNYYRSLDHCSPSFKQLDMERMSPKALLA
EDKQISRIKSHTDIHIHEDVGVIINYAYSRSCSTEDKPMMNWTKLVKAFVSVKFQWPDLK
DTVSRRNVCEHCGMSRDFLNNIPVAVLTNEFVFSSKEVESLRAKSNESTSSLDHFDAEVE
EGEFIPDVENIQLRVRCLPTNNSMHSTYGHWSGSEEHKSSRDDSNNEVGSSEYFGRTSKE
CDANRGISCCTLAVLCRLLQVMYERLLVAKNLSEGASTHDSYAHFKEKLCSLIDGSTDNW
NFEQHCLKFLGPNSYVLFTLDKLIDRVIKQICKIYPSREDSSVLQRQERSRRTFNILKDP
ALPARRTNSSKELLHHQNARGTSIELPKQGREEAKGGCESHGDTGKMKQNHFQRRKKRAL
ENGPPSFSQPGSGNQAHN
NT seq 2577 nt   +upstreamnt  +downstreamnt
atggattcttccgccggtgatcctggcgatggcgttccgtccaaaagggcgaggacggag
agggatccctacagagtcgagacgatggaatttttggtacttgtcaagtcagagcttcct
gacgacgtatacagccatttcgtccgatctatgatcaagataaggaggcagaggaacatg
tcgattgaaaaatgcaaagaaattattctcgagatattggacggccaacctgaagccata
caggtcttcgagcacttcatccaaggatatagcccttgcagagcaaagatgcgtagcaag
gcacacaatttcgttgagagagtgaaggcatgtcctgatatcagccgcgaagatttccat
gctttgctgaacgttcttgctaaatattataagaacgaaatcaagaccagcgaagaagtt
ctcgaaaaggttgagagaatcataggtaactatcccgagttcctagaagagttcaaaatt
tttgtgcctcaccacctaagggctcatctgccaaatgagaaatcttgcacaagtccaaag
agtagtcgagtcagcgagacgtttgtgagttttactctagatgctatgaataaattggat
ggtctccgagtaaaagcaaccaatggaagaaaccaagcgactccattgaagtatactcag
gaccaaaaccaaaaccatgaaggcagaggttatagtttgaggcataaacaaactaagaga
accactggcctgattgaaaatcctagaaagcaaggtgatgacaaatcacctcatgcagaa
gatgatgaggaacacaaggctgaacctttgcttcagtggagtacctcacgagaaaacgaa
ttacccctaaaagtggatcctagtaattgcaagcattgcactcctagctattgcctgcta
ccaaagaattgtgtgactctccagtcaagctaccaaactgaacttggaaggtctatttta
aatgattctttggtttctgttacatctggacgtgaggattgctacaagttcagaactaaa
aatcaatatgaagaaaacatgtttaagtgtgaagatgacttgtttgagagtgacatgcta
ttgcagaggtttagagcaactgctgactttattgaggatcttcaatatcggtttggcagc
aatgtgaaaattcaagaacacctaactcctctacataagaggtgcattgaacagctatat
gatgattctggcattgacatgcttgatgctttgtcagaatctgagaacaccagttctgct
cttgctgttatactttctcgtctaaatcagaagataggagatttctccgaggcacgatta
tccttgaataaaatgtgcccagatactgttgccaataattactacagatcacttgatcat
tgtagtccctccttcaaacaactagacatggaaaggatgagcccaaaagctttgctggca
gaagacaaacaaatcagtcggatcaaatctcatactgatattcacattcatgaggacgta
ggcgttatcattaactatgcatatagtagaagttgttctactgaagataagccaatgatg
aattggacaaagttagtaaaggcatttgtttctgtgaagtttcaatggccagacttgaag
gatacagtttctcgcagaaacgtttgtgaacattgtgggatgagcagagattttctcaat
aatattcctgttgctgtgcttactaatgagtttgttttttcttcaaaggaagtggaaagt
ctaagagccaagtccaatgagtctacttcttcgcttgatcattttgacgcggaggttgag
gagggtgagttcataccagatgtagaaaatatacagttgcgtgttcgatgtttgcctacc
aataattctatgcatagtacctatggacattggagtggatctgaagagcataaatcatca
agagatgactccaacaatgaggttggaagttcagaatattttggaagaacatctaaagaa
tgtgatgcaaacagaggaatatcttgttgcactctggctgtgctctgccggcttctccag
gttatgtacgagagactactagtagctaagaatctttcagaaggagcaagcacccatgat
tcatatgcacatttcaaggagaaactctgcagcctgattgatgggtctactgacaattgg
aactttgagcagcactgcttgaaatttcttgggcccaactcctacgtactatttactttg
gataagcttatcgatcgtgttatcaagcagatttgcaagatatatccaagccgtgaagac
agctctgtccttcagcggcaagagaggtcaagaagaacatttaacattttgaaagaccca
gctttgccggcaagaagaacaaactcgtccaaagagctgttgcatcatcaaaatgcaaga
ggcacatcaattgagttgccgaagcaaggtcgtgaggaagcaaaaggaggttgtgagtcc
catggtgacactggaaaaatgaaacagaaccattttcagagaaggaaaaaacgcgctttg
gagaacggtccaccgagtttttctcagcctggctcagggaatcaagctcataattga

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