Oryza sativa japonica (Japanese rice) (RAPDB): Os09t0101100-01
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Entry
Os09t0101100-01 CDS
T02163
Symbol
Os09g0101100
Name
(RAP-DB) HhH-GPD domain domain containing protein.
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Os09t0101100-01 (Os09g0101100)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dosa03036
]
Os09t0101100-01 (Os09g0101100)
03400 DNA repair and recombination proteins [BR:
dosa03400
]
Os09t0101100-01 (Os09g0101100)
Chromosome and associated proteins [BR:
dosa03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
Os09t0101100-01 (Os09g0101100)
DNA repair and recombination proteins [BR:
dosa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Os09t0101100-01 (Os09g0101100)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
RAP-DB:
Os09t0101100-01
LinkDB
All DBs
Position
chr09:complement(join(247822..248781,247164..247360,246896..247064))
AA seq
441 aa
AA seq
DB search
MAAAEEAILQKRKKQAEEMLAPLPFPHLTAAEETPPNPETPISGEAVAVAVRRKERKRKN
EEAAGVGKEKKRKSREGPPAPEARRKERKRMLMPRQPSHDQIHGIQVQANPPPLAGGRDE
AYGRSSCKKIRVLSNREIIKMRIQLRKHQPLPQGIFDPEIIMASNSTQQDPNHSSPFGAF
FDQFCYKPTRQDRTPPLPRTPDLLVRPPPRDHLSSASSQLMTNHTCKINSTCKTTTFKTR
SGPNQGNTKVKEMARVNKERKPAPLLSRAEKRSDKYRRLPLDQLVPPPRSPHKLLQEKYA
SDPWKVIVICMLLNLTQGKQVRRKVKGFFKRYPDAQTAFSADPEKMAKYLAPLGLQRVKV
NRIQRFSKAYVEEEWTYITELCGVGKYAADAYAIFCAGRATEVVPADHKLVDYWKYVCFE
LPMIQVGISTQVSVNCTSLVS
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcagaggaggcgattctgcagaagcggaagaagcaggcggaggagatgttg
gccccgttaccttttccccacctgacggcggctgaagagaccccgcccaaccccgaaacc
ccaatctcgggagaggcggtggcggtggcggtgaggagaaaggagcggaagaggaagaat
gaggaggccgcgggcgtggggaaggagaaaaagcgaaagagtagggaggggccaccggcc
ccggaggcgaggaggaaggagcggaagcggatgctgatgcccagacaaccatctcatgac
caaatccacggcatccaggtacaagcaaaccctcctccactggccggaggacgagatgaa
gcgtatggcaggagtagctgcaagaagatccgcgtcctgagcaaccgcgagatcatcaag
atgaggatacaattgaggaagcaccagccactacctcaaggcatttttgacccagagatt
attatggcttccaattccacccagcaggaccccaatcattcttcgccattcggcgccttc
tttgaccagttctgctacaaacccacccgccaagatcgcactcccccacttcctagaacg
cctgaccttctagtcaggccgccgcctcgggatcatctatcatctgcttcatctcagctc
atgacaaatcacacctgcaagatcaacagcacctgtaagacaacaaccttcaagacaaga
tcaggaccaaaccaaggaaatacgaaggtaaaagaaatggcaagggtgaacaaggaacga
aaaccagcaccgctgcttagccgtgctgaaaagaggtcagacaaataccgccgccttccg
ttggaccagctggtgcctccgccacgctcccctcataagctactgcaggaaaaatacgct
tctgacccgtggaaggtcattgtcatctgcatgctcctcaacttaacacaggggaaacaa
gtgaggaggaaagttaaggggttcttcaaacgatatcctgatgctcaaactgcatttagt
gctgatcctgaaaagatggccaagtatctggctcctctgggtttgcagcgtgtaaaagta
aacagaatccagagattctctaaggcgtatgttgaagaagaatggacctacattactgag
ctttgtggtgttggcaagtacgcagctgatgcttatgcaatcttctgtgcgggcagggca
acagaggtggtacctgcagaccataagttagttgattactggaaatatgtttgtttcgag
ttgcccatgattcaggtaggaatctcgacacaagtttcagtgaattgcacatcacttgtg
agctag
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integrated database retrieval system
