Oryza sativa japonica (Japanese rice) (RAPDB): Os12t0287300-01
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Entry
Os12t0287300-01 CDS
T02163
Symbol
Os12g0287300
Name
(RAP-DB) Similar to SufS.
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00450
Selenocompound metabolism
dosa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Os12t0287300-01 (Os12g0287300)
Enzymes [BR:
dosa01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
Os12t0287300-01 (Os12g0287300)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
Os12t0287300-01 (Os12g0287300)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Aminotran_1_2
Motif
Other DBs
RAP-DB:
Os12t0287300-01
LinkDB
All DBs
Position
chr12:complement(join(10972204..10972284,10971685..10971871,10969446..10969591,10969280..10969352,10969048..10969111,10968293..10968392,10967961..10968119,10963706..10963876))
AA seq
326 aa
AA seq
DB search
VFTRNATEAINLVAYSWGMSNLKQGDEIVLTIAEHHSAIVPWQFVSQKTGATLKYVGLTK
EGVPDIEQLKGLLSNKTKIVVVHHVSNVLGSMLPIEDIVTWSNRIGAKVLVDACQSVPHM
PVDVQRLGADFLVASSHKMCGPTGVGFLHGKFDLLSSMEPFLGGGEMIADVFQDKSTYAE
PPSRFEAGTPAIGEAIGLGTAIDYLSQIGMQKIHEYENELATYLYESLIAVPNVRIYGPA
PCQTVHRAPLCSFNVENVHPTDIAEILDLQHGVAIRSGHHCAQILHRTLGINASARASLH
FYNTKEEVDVFVDALKDTIDFLTSEH
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
gtttttacacgtaatgctactgaagctatcaatttagtagcatattcgtggggcatgtcc
aacttaaaacaaggagatgagattgttcttacgattgcagagcatcatagcgctattgtt
ccttggcaatttgtttcccagaagactggtgctactttaaagtatgttgggctaaccaaa
gaaggggttccagacattgagcagttgaaaggtcttctgtcaaacaagacgaagattgtt
gttgttcatcatgtctcaaatgtactcggttcaatgcttcctattgaggatattgtaaca
tggtcaaacagaattggtgctaaagttcttgtcgatgcttgtcaaagtgttcctcatatg
cctgtcgatgttcagaggcttggtgcagattttcttgttgcatcatcacacaagatgtgt
ggccctacaggcgttggattcttgcatggaaagtttgacctcttatcatccatggagcct
ttcttaggtggtggtgaaatgattgcagatgtgttccaagacaaatccacatatgctgag
cctccttctagatttgaagctggaacacctgcgattggagaagctataggattgggaaca
gcaattgattatttgtcacaaattggcatgcagaagatccatgagtatgagaatgagttg
gcgacctatctctatgagagccttattgctgttccaaatgttcggatctacggtccagct
ccatgccaaactgttcaccgcgccccattatgttcttttaatgttgaaaatgttcatcca
acagatattgccgaaattcttgacctccagcatggcgtggcaattcggtcaggccatcat
tgtgcacagatattgcatcgaactcttggtatcaatgcaagtgctcgtgctagtcttcac
ttctacaataccaaagaggaggtggatgtctttgtcgatgcgctgaaagatactattgat
ttccttacttctgaacactag
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