Desulfosarcina ovata subsp. sediminis: DSCO28_08600
Help
Entry
DSCO28_08600 CDS
T06286
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov00521
Streptomycin biosynthesis
dov00523
Polyketide sugar unit biosynthesis
dov00541
O-Antigen nucleotide sugar biosynthesis
dov01100
Metabolic pathways
dov01110
Biosynthesis of secondary metabolites
dov01250
Biosynthesis of nucleotide sugars
Module
dov_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
DSCO28_08600 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DSCO28_08600 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DSCO28_08600 (rmlC)
Enzymes [BR:
dov01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
DSCO28_08600 (rmlC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
BBO80294
UniProt:
A0A5K7ZG41
LinkDB
All DBs
Position
complement(913288..913848)
Genome browser
AA seq
186 aa
AA seq
DB search
MKIIRTRIPDVFTLEPKVFGDNRGFFFESYNENVFKSLTGNDPAFVQDNHSKSKKNVLRG
LHYQIRQPQGKLVRVICGDVFDVAVDIRRSSPTFGKWVGEYLTAENKKQLWVPPGFAHGF
LVLSDVAEFLYKTTDYYAPEFERCIRWNDPDLSIQWPINDAPLVSEKDAGGVLFRDAEVF
TYIQNL
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattatccgaacccgtattcctgatgtctttacccttgaaccgaaagtgtttggt
gacaatcgcggctttttttttgaaagctataatgaaaacgtatttaaatcattgactggc
aacgatccagcgtttgttcaggacaatcattccaaatcaaaaaaaaatgttttacgcggc
cttcactatcagatcaggcaaccccaggggaaactggtccgcgtgatttgtggggatgta
tttgatgtggcggtggacatccgccggtcgtcaccgactttcgggaaatgggtcggagaa
tatctcactgctgaaaacaaaaaacaattatgggtcccgccaggattcgcccatggtttt
ctggtcctgagcgatgtggccgaatttttgtacaaaacaactgattattacgctcctgaa
ttcgaacgctgtatccgctggaacgaccccgacttgagcattcaatggccaatcaacgac
gcccccctggtttccgaaaaggatgcaggcggggttttgttcagggacgccgaggtgttc
acatacattcaaaatttataa
DBGET
integrated database retrieval system