Desulfosarcina ovata subsp. sediminis: DSCO28_69640
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Entry
DSCO28_69640 CDS
T06286
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DSCO28_69640 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dov03400
]
DSCO28_69640 (recO)
DNA repair and recombination proteins [BR:
dov03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DSCO28_69640 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DSCO28_69640 (recO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
TSP1_spondin
DZR
Motif
Other DBs
NCBI-ProteinID:
BBO86398
UniProt:
A0A5K8A1Y8
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All DBs
Position
complement(7981915..7982712)
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AA seq
265 aa
AA seq
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MAGSNTPAILLRRIEFGDFDLIVTLFTLAQGKTSAIAKSAKKSVRRFPGVLEPFSQLEVV
LTQGKRKGMPVLQEASLENPFFKIRENIIKTAYASYWSEIIYLWMAEGEPHENLYRLTHH
VLTELNRGEIPVEVLSILFQMRFLTIAGFRPNFEHCHACKTRLDQIRHRSVISDPSKGGI
ACPSCAGIAGDQLRISKGTLKQLAWTDNGDLERAARVRFTPLAITEGLAFLEAFVPYHIG
KTPKSLKVLRAVRNTIHARKKRSHA
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggccggttcgaacacccccgccatcctgctgcgccgcatcgaattcggcgatttcgat
cttatcgtgaccctgttcaccctggcccagggaaaaaccagcgccatcgccaaatcagcc
aaaaaaagcgtgcgccgctttcccggtgtgctggaaccgttctcccagctcgaggtggtc
ctgacccagggaaaacgcaagggcatgccggttctccaggaagcctccctggaaaatcca
tttttcaaaatccgtgaaaacatcatcaagaccgcttacgccagttactggtcggaaatc
atctatctgtggatggccgaaggggagccccatgagaatctttaccggctgacccatcat
gtgctcaccgagctcaaccggggagagatccccgtggaagtactcagcatcctttttcag
atgcgatttctgaccattgccggattccgtcccaatttcgagcactgccacgcctgcaag
acccgccttgaccagatccgtcaccgctcggtgatctcggacccgtccaaaggcggcatc
gcctgtcccagttgcgccggcatagccggtgatcagctgcgcatctccaaggggaccctg
aaacaactcgcctggaccgacaacggcgacctggaacgggccgcccgcgtgcgcttcacc
ccgctggcgattaccgagggactggcgtttctggaagccttcgtcccctatcacatcgga
aaaacccccaagagcctcaaggtgctccgggcggtaaggaacaccatccatgcaagaaaa
aaacggtcccatgcatga
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