KEGG   Dendroctonus ponderosae (mountain pine beetle): 109541999
Entry
109541999         CDS       T04899                                 
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
dpa  Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dpa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109541999
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dpa03041]
    109541999
   03036 Chromosome and associated proteins [BR:dpa03036]
    109541999
Spliceosome [BR:dpa03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    109541999
 Complex B
    109541999
 Complex C
   U2 SnRNP specific factors
    109541999
Chromosome and associated proteins [BR:dpa03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    109541999
SSDB
Motif
Pfam: SF3b1 HEAT_EZ HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG UME CEP104-like_TOG
Other DBs
NCBI-GeneID: 109541999
NCBI-ProteinID: XP_019766580
EnsemblRapid: LOC109541999
LinkDB
Position
Unknown
AA seq 1318 aa
MDIPRTHEDIEAQIRDIQSKKKEAPPEGGEKGVSLGESGFFDSEIYDGKDKKYEGYVTSI
AANDEVDDEEEEVGYSQKRTGLGAPVALLNDIAQSEKDYDPFADRRRPTIADREDEYRQK
RRRMIISPERADPFADGGKTPEVNARGYTQIMKETLLKGEENEVRRKIIERAKDGTLKPQ
NGDAKPAPKKRGRWDQTVEETFIPAKKKTLSVSTPSTAATPVWEGDKTPADIRWDETPGH
KGSETPGATPGQSTRMWDATPGAATPGRETPGHDKASSRRNRWDETPKTERETPGHSSGW
AETPRTDRTGADLIQETPTPGASKRRSRWDETPSAATPSVSMTPGAMTPQTPHGTPGHAT
PMLTPGGSTPVGTKAMAMATPTPGHLASMTPEQLQAFRWEREIDERNRPYSDDELDAMFP
PGYKVLPPPAGYIPIRTPARKLTATPTPLVGQTPVGFFMQNEDKSAKYMDNQPKGQNLPF
MKPEDAQYFDKLLVDVDEEALSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREF
GAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDED
YYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLP
FLKAVCRSKKSWQARHTGIKIVQQIAILMGCAILPHLKSLVEIIEHGLVDEQQKVRTITA
LGIAALAEAATPYGIESFDSVLKPLWKGIRTHRGKGLAAFLKAIGYLIPLMDAEYANYYT
REVMLILIREFQSPDEEMKKIVLKVVKQCCSTDGVEPQYIKEEILPQFFKHFWNHRMALD
RRNYRQLVDTTVEIANKVGASEIINRIVDDLKDENEAYRKMVMESIEKIMGNLGAADIDS
RLEEQLIDGILYAFQEQTTEDVVMLNGFGTIVNQLGKRVKPYLPQICGTILWRLNNKSAK
VRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGM
TKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELL
KAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPF
TVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVAPLLEDALMDRDLVHRQ
TACAAIKHMALGVYGFGCEDALVHLLNYVWPNIFETSPHLVQAFMDAIEGMRVALGPIKV
LQYSLQGLFHPARKVRDVYWKIYNSLYIGGQDALVAGYPRIANDPKNQYIRYELDYIL
NT seq 3957 nt   +upstreamnt  +downstreamnt
atggatattccacgcacccatgaagatatcgaagcccagatcagggacattcagagcaag
aagaaggaggccccaccggagggcggcgagaaaggcgtcagcttgggcgagagcggcttt
ttcgacagcgaaatctacgatggcaaggacaaaaagtacgaggggtacgtcacctccatt
gcggccaacgatgaggtggacgacgaggaggaggaagtgggctattcgcagaagcgcaca
ggcctgggggcccccgtggccctgctgaacgacattgcgcagagcgaaaaggactatgat
ccgtttgcggataggcgccggcccacgatcgccgaccgcgaggacgagtaccggcagaag
cgacgtcgcatgataatcagtccggagcgcgccgaccctttcgctgatggcgggaaaacg
cccgaagtgaatgcgcgcggatacacccagatcatgaaggagacgttgctcaaaggcgag
gaaaacgaggtgcgccgaaaaataatcgagcgcgccaaggacgggacgctgaagccgcag
aacggggacgcaaagccggcccctaaaaagcgcggccgctgggaccagacggtcgaggaa
accttcatccctgccaagaagaagacgctgtccgtgtccacccccagcactgcagccacc
ccagtttgggaaggcgacaaaaccccagcggacatccgctgggatgagacgcccggacat
aagggcagcgagacgccaggggcgacgccggggcagtccacgcgcatgtgggacgccaca
ccaggcgccgccactccgggccgagagacgcccggccacgataaagcctcctccaggcgc
aaccgatgggacgagacgcccaagactgagcgcgagacccctgggcattcaagcgggtgg
gcggagacgcccagaaccgaccgcactggggcggatctcatccaggaaacccccactcca
ggggcctccaagcggcgctccagatgggacgagacgccatcggcggccacgcccagcgtc
agtatgacgccaggcgcgatgacgccgcaaaccccccacggcaccccagggcatgccacg
cccatgctgacgcccggcggctccacccccgttggcaccaaggccatggccatggccacg
cccactcctggtcatttggcgtcgatgacgcccgaacagctgcaggcgtttaggtgggag
cgggagatcgacgagcgcaaccgcccctattcggacgacgaactggacgccatgttcccg
cccggctacaaagtgttgccgccccctgccggctacatcccgatcagaacgccggcgcgc
aagctcacagccacgcccacgccgctagtcggccaaacccccgtgggctttttcatgcag
aacgaggacaagtcggccaagtacatggacaatcagcccaagggccagaatctgcccttc
atgaagccggaggatgcgcagtatttcgacaaactgctggtcgatgtggacgaggaggcg
ctcagccccgaggagcagaaggagcgcaagatcatgaagctgctgctcaagatcaagaac
ggcacgcccccgatgcgcaaggcggccttgcgccagatcaccgacaaggcgcgcgagttc
ggggcggggccactgttcaatcagatcctgccgctgctgatgagtcccacgttggaggac
caggagcgccatctgctggtcaaggtgatcgaccgcatcctgtacaagctggacgatctg
gtgcgtccctacgtgcacaagatcctggtggtgatcgagccgctgctgatcgacgaagac
tactacgcgcgcgtggagggccgggagatcatctccaacttggcgaaggccgccggcctc
gccaccatgatctccaccatgcggcccgacatcgacaacatcgatgagtacgtgcgcaac
acgacggcgcgagcctttgcagtggtcgcgtcggccttgggcatcccctccctgctgccc
ttcctcaaggccgtctgtcgctcgaagaagtcgtggcaggcgcgccacaccggcatcaag
atcgtgcagcaaatcgccatcctgatgggctgcgccatcctgccccatctcaagtcgttg
gtggagatcatcgagcacgggctggtcgacgagcagcaaaaggtgcgcaccatcaccgcc
ctcggcattgcggccttggcggaggcggccacgccctacggcattgagagcttcgactcg
gtgctgaagcctttgtggaaaggcatacggacgcatcgcggcaaaggcctggcggccttc
ctgaaggccatcggctacctgattccgctgatggacgccgagtacgcgaactactacacc
agggaggtgatgctgatcctcatccgggagttccagtccccggacgaggagatgaagaag
atcgtcctcaaggtggtgaaacagtgctgttcgaccgacggcgtcgagccgcagtacatc
aaggaggagatcctgccgcagttcttcaagcacttctggaaccaccgcatggcgctggac
aggcgcaattacaggcaactggtggacacgacagtggagattgccaataaagtgggcgcc
tccgaaatcatcaaccgcatagtggacgatctgaaggacgagaacgaagcctaccggaaa
atggtgatggagagcatcgagaaaatcatgggcaacttgggggcggccgacatcgactcc
cgcctggaggagcaactgatcgacggcattctctacgcgttccaggagcaaaccactgag
gatgtggtgatgctgaacggattcgggaccatagtgaaccagctgggcaagcgcgtcaag
ccgtatttgccgcagatttgcggcaccatcctgtggcgactcaacaacaagtcggccaag
gtgcgccagcaggcggccgacctgatttcgcgcatcgccgtcgtgatgaaaacctgccag
gaggagaaactgatgggccatttgggcgtggtcctgtacgagtacctcggcgaggagtac
ccggaggtgctcggctccattctaggcgccctcaaggccatcgtgaacgtgattggcatg
acgaagatgacgccgccgattaaggacctgctgccgcggctgacacccattctgaagaac
cggcacgaaaaggtgcaggagaactgcatcgatttggtggggcgcattgcggaccgcggc
cccgagtatgtgtcagcgcgcgaatggatgcgcatctgcttcgagctgctcgagctgctg
aaggcccacaagaaggccatccggagagcgacggtgaacacgttcggctacatagccaag
gccatcgggccccacgacgtgctggcaacgctgctcaacaacctcaaagtgcaggagcgc
cagaaccgcgtctgcaccacggtggcgatcgccatcgtggccgaaacctgctccccgttc
acggtgttgccggcgctgatgaacgagtaccgggtgcccgagctcaacgtccaaaacggc
gtgctcaagtcgctcagcttcctcttcgagtacatcggagaaatgggcaaggactacatc
tacgcagtggcgccgctgttggaggacgcgctgatggaccgcgacttggtgcacaggcaa
acggcctgcgcagccatcaagcacatggcgctgggcgtgtacgggttcgggtgcgaggac
gcgctggtccatctgctcaactacgtctggcccaacatcttcgaaacgtcgccccatctg
gtgcaggccttcatggacgccatcgagggcatgcgggtcgccttgggccccatcaaggtg
ctccagtactcgctgcaggggctgttccatccggcgcgcaaagtgcgcgacgtctactgg
aagatctacaactcgctctacattgggggacaggacgcgttggtggccggatatccgcgc
atcgccaacgaccccaagaaccagtacatcaggtacgagctcgactacattctgtaa

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