Dendroctonus ponderosae (mountain pine beetle): 109546330
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Entry
109546330 CDS
T04899
Name
(RefSeq) crossover junction endonuclease MUS81 isoform X1
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Pathway
dpa03440
Homologous recombination
dpa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109546330
03460 Fanconi anemia pathway
109546330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpa03400
]
109546330
DNA repair and recombination proteins [BR:
dpa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
109546330
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
MUS81-like_WH
EME1-MUS81_C
Pox_RNA_Pol_22
Motif
Other DBs
NCBI-GeneID:
109546330
NCBI-ProteinID:
XP_019772805
EnsemblRapid:
LOC109546330
LinkDB
All DBs
Position
Unknown
AA seq
641 aa
AA seq
DB search
MSACEMKRVSIRPRNPNPLFEKWLIQWIDQAPIGEDSKINFPRALKSLRLYPLPLESGRE
CRILKGFNLRLCALLGEKLNKYKANGSSKEEQIISPITIDEETTHQETVLNITDKSSKSY
VPKYRSGAYAILIALYGQSKLEDYPGYLLKADIIKHGKDFLDSSFTKPEPGSRYTAWSSM
ATLISKRLVSKVSNPAKFSLTDEGRIIAEKLYEQTKRLELDSSQLITSKTNNKVRYEVAY
AGVATNEPENFIIDLEDDSSDGEPKAGHIQVSYGTSRLLSENVVSDSENGSNNQKKRLLS
KFASTDTISSCSVTRPNKKQKTGSVKMSSASSVKKALSSQSSSTQLNNHHINPGTAPQIH
FILKPHSFDIVLYVDKNETSGSLNVKDDNLLRELDKSGVKYEVKDLKVGDFTWTCRDRSN
QNELVLPYIIERKRMDDFAQSIKDRRYYEQKFRLKKSGIENLIYLIENYGNNKNLCLPIE
SLRQAATNTAIQENFSIKFTNDYKDTAEYLVNFTDILEIMFKSKTLASCDKKNMLPVDIN
SDLVSLMIFQEFNLASMKSKKMTVSDLFVKMLIQIRGMSVERALAIIQQYPSPYLLKEAY
ESNDSESVNEKLLATIKYATGKKIGPALSKIVFRFFCKLQY
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcctgtgaaatgaaacgtgtttcaataaggcctagaaatcccaatccactgttt
gaaaaatggttaattcaatggatagaccaggcaccgattggcgaagattcaaaaatcaat
tttccccgagctttaaaatcactgagattgtaccccttgcccttagaatcgggcagagaa
tgtagaattttgaaaggctttaatctgagactgtgcgctctgcttggtgaaaagttgaat
aagtacaaagccaatggaagtagtaaagaagaacaaattatatccccaattacaatagat
gaagaaacaacgcaccaagagacagttttgaacattacagataaaagctcgaagtcatac
gtgcctaaatatcgctctggggcatatgcaattttaatagccttgtatggacaaagtaaa
ttggaggattaccctggatatcttttaaaagctgatataattaagcatggcaaagatttt
ctggactcatctttcactaaacccgaacctggctctagatatacggcttggtcatcaatg
gctacgttgatatcaaaacgtttagtttcaaaagttagcaatccagctaaattttcttta
acagatgaaggacggattatagctgagaaattatacgaacagactaaacgccttgaattg
gatagcagccagctaatcacttcaaaaactaataataaagttaggtatgaagttgcatat
gctggagtagcaacgaatgaaccagaaaatttcattatcgatttggaggatgatagttct
gacggagaacccaaagctggccatattcaagtatcttatggaaccagcagattgctttca
gaaaatgtagtttccgattccgaaaacggctctaacaatcagaagaaaagacttcttagc
aagtttgcatcgactgacacaataagctcatgttcagtcacacgaccaaataagaaacag
aagactggttcagtaaagatgtcatctgcaagctcagtaaaaaaagctttgtcatctcag
agctcaagcacacagttaaataaccatcacattaatccaggaacagctccacaaatacat
ttcattttgaaaccgcattcattcgacatcgttttgtatgtggataaaaatgaaacttca
gggtccttaaatgtgaaagacgacaaccttctaagagaattggacaaatccggtgtaaaa
tacgaagtaaaggatttaaaagttggtgactttacctggacttgcagggaccgatcaaat
cagaatgaactagttttaccgtatatcattgaacgaaagcgaatggatgattttgcccaa
agcataaaggataggaggtactacgagcaaaagtttaggctaaaaaaatctggcattgaa
aatttgatctacttaattgaaaattatggcaacaacaaaaacctatgtttgccaattgag
agtttacgacaagctgcaacaaacactgccattcaagagaacttttccattaaatttacc
aacgattataaagacacagctgaatatttggtaaattttaccgatattttggagattatg
ttcaagtcgaaaacattagcaagctgtgataagaaaaatatgctgccagtggatatcaac
agcgatcttgttagcctgatgattttccaggaatttaatttagcatccatgaaaagcaag
aaaatgacggtcagcgatcttttcgtgaaaatgttgattcaaattagaggcatgtcagtg
gaaagggctttagccataatccaacaatatccctccccatatttgctgaaagaggcatat
gagagtaatgattccgaaagtgtaaacgaaaaacttttagctactataaaatatgccaca
gggaaaaaaattggcccagcacttagcaagatcgttttcagatttttttgtaagctgcag
tattaa
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