Drosophila persimilis: 6592646
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Entry
6592646 CDS
T01063
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
dpe
Drosophila persimilis
Pathway
dpe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
6592646
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpe03019
]
6592646
Enzymes [BR:
dpe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
6592646
Messenger RNA biogenesis [BR:
dpe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
6592646
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
MMR_HSR1
AAA_22
CbiA
TniB
AAA_16
nSTAND3
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
6592646
NCBI-ProteinID:
XP_002017867
FlyBase:
FBgn0154675
UniProt:
B4GGT6
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MSDHQSRGQDFSLEADSELRFEIEQKDAKVLVTLVNGFAELFGTELVKKKKYEFGMGAKV
AIFTYQGCVLHVTGKMDVCYISKETPMVQYVNCHAALEQFRTEAEEKDRRGPVAMVVGPT
DVGKSTLCRILLNYAVRVGRRPLYADLDVGQGAIAISGNVATILIERPASVEEGFPKTAP
LVYHFGHKSPSGNSVLYNAVVSKMAEVTLQSLNGNKRTKSSGIIVNTCGWVKGHGYAHLL
HAARAYGACAIFVLDQERLYNELLRDVPSSVHVVLLPKSGGVVERSKELRHECRDQRIKE
YFYGNARAPFYPFSFEVKFQELRLYKIGAPPLPDSCMPIGMKAEDNKTKVVAVTPTPALI
HHVLALSFAESVDDDVIGTNIAGFCCVTEVDMERQVVMLLSPQPRPLPPNALLLWSELQF
MDNHT
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatcatcaaagcagaggtcaggacttcagcctggaggcagactccgagctgcgt
tttgaaatagagcagaaggacgccaaagtgttggttacactagtcaatggatttgcggag
ctctttggaaccgagctggttaagaaaaagaaatatgagtttgggatgggggccaaggtg
gcgatcttcacataccaaggatgcgttcttcatgtcactggcaaaatggacgtttgctac
atatccaaggagactccgatggtccagtacgtcaattgtcacgcggcacttgaacagttt
cgcacggaggccgaggagaaggatagacgtggtccggtggccatggtggtgggacccacg
gacgtcggcaagagcacgctctgccggattctcctgaactatgcagtcagggtcgggcgc
cggcctctctacgcggacctcgatgtgggccagggagcaatcgccatatccggcaatgtg
gccaccatactcatcgaaaggccagccagtgtcgaggaaggttttcccaagaccgccccg
ctcgtctaccacttcggacacaagtcacccagcggcaacagtgtcctctacaacgcagtg
gtctccaagatggccgaggtcacgctgcagtcacttaacgggaacaagcgcacaaaaagc
tccggcatcatagtcaacacctgcggctgggtcaagggccatgggtatgcgcatctgctt
catgcagccagggcctatggtgcttgcgctattttcgtattggatcaggagcgactgtac
aacgagctgctgcgggatgtgccctcaagcgttcatgtggtcctgttgcccaagagtggc
ggtgttgtggagcgcagcaaggagctgaggcacgagtgccgggatcagcgcatcaaggaa
tacttctatggcaatgcccgtgcccccttctatccgttttcctttgaggtgaaattccag
gagctgcgattgtacaaaattggcgctcctccgctgccagactcctgcatgcccatcggc
atgaaggccgaggacaacaagacaaaagtggtggctgtaacgccaaccccggcactgatc
catcacgtgttggccctgtcttttgcagagtccgtggacgatgatgtgattggcacgaat
attgcaggcttctgttgcgttaccgaggtggatatggaaaggcaagtcgttatgctcctc
tcgccgcaaccacgacccctgccgccgaacgctctgctgctgtggtcggagctgcaattc
atggacaaccatacctag
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