Drosophila persimilis: 6602687
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Entry
6602687 CDS
T01063
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
dpe
Drosophila persimilis
Pathway
dpe03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
6602687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpe03400
]
6602687
Enzymes [BR:
dpe01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
6602687
DNA repair and recombination proteins [BR:
dpe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
6602687
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
RNA_ligase
BRCT
DNA_ligase_A_C
Sirohm_synth_C
Motif
Other DBs
NCBI-GeneID:
6602687
NCBI-ProteinID:
XP_002027697
FlyBase:
FBgn0160012
UniProt:
B4HA18
LinkDB
All DBs
Position
Unknown
AA seq
916 aa
AA seq
DB search
MDIATTVKFRDVCELFEKVKAAKKVQDKEDVLRSYYESFCRHREAFRQAAGLTDEQSENG
SSSFHSVLRLLLPSADTRRDNYGLQITALGRLYTRVLQLTRDSRDAIMLQHRTGSSFRDY
GDVVYAVLVSRCFNPPSDLRLNAIHEMLDTIANEDTSVKEQELIRFTEQASAREQKWLIR
ILLKSLGLGIGEQRIFGVLHPNAKDIYQRCSDLSHVCNLVADKVSDLEVSDTKITGNSHP
STVNLNAVIRPFHQIRPMLCERFPGDIQELMQSDVLYLETKMDGERFQLHIDRGRFMYLS
RNGVDYSNNFGESYSRGTLTPQLRGLLPLGLQTIILDGEMMVWDTNQKRYREKGENTDVK
NLKPDRSWRPCFVVYDLLYFNGQSLLDLTYIQRSYKLQKLIGEQQGVLQLMRGTKIGSIE
EFNKLFQQALDSNAEGIVLKKQSSIYQPGVRVGGGWYKDKADYIKGLITEFDVLIIGGFY
NRKRTFIDSFLLGVLQPMANSDSRHEVYSIGCVTNNTRQAVVLNHTLRPHWHDTTKEPPP
LWYHYMANEKIGSPDLWIDPHNSIILQVKAADLTPNSAFYTPKALHFPRIELKRDDKAWN
ECMTLQEFNQLCEGSGPIKKLNKRHLCLDDLTTKRKRLRMTPAERRRLGLAIYEKRYDVG
TSSSCTKLFEGLSFCILSGAPGQSKHKLQELAAKNGGCIVENPLPNDPKCFCIAGDQTFL
VKRLMQQQPCTSDIVRMEWLIRVCQQQELELRPKDLLSATEPLQDDLAEWFDKLGDSYTK
DFASVDELLELLQDIGKEELAVDHVSQSEINAFEDKLLGQATRNIFRDLHAYFYDPNGDE
LSKVLFLQNGGTLASESDPQLNLVFVCLSSDIDDNYFESWLHNHLSSYSGEVLNSAWIHQ
SHRERRLLKMSCFSFK
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggatatagccacaaccgtaaagtttcgtgatgtctgcgagctgttcgaaaaggtcaag
gcggcaaagaaagttcaagacaaagaggatgtgctgagaagctactatgagtcgttctgc
cgacatcgggaggcatttcgccaggcggctggcttaacggacgagcagagtgagaatggc
tccagcagcttccactcggtcctgcgtctcctgttgcccagtgcagacactagaagggac
aactatggcctgcaaataacagctctgggccgtctctacaccagagtgctccagctaacc
agggattctcgcgatgccataatgctgcagcatcgtactggctcctcgtttcgggactac
ggagatgtggtctatgccgtacttgtgtcccgttgctttaatccgccaagcgatctgcgt
ctcaacgccatccacgaaatgctagatacaattgccaatgaagatacatcagttaaggaa
caggaactgatacgtttcacagaacaagcctcggccagggagcagaagtggctaatccga
attctcctaaagtccctgggattgggcataggggagcagcgcattttcggagttctgcat
ccgaatgctaaggacatttaccagcgctgctcagatctaagtcacgtctgtaatttagtt
gccgataaggtatctgacctggaagtcagcgacacgaagatcacaggcaacagccaccca
tcaactgttaatctgaacgcagtcataaggcccttccatcagatccgtcccatgctttgc
gagcgttttcccggcgacattcaggagcttatgcaatccgacgttctctatctggagacc
aaaatggatggcgagcgtttccagctgcatattgatcgcggtcgattcatgtacctttcc
cgaaacggagtggactattctaacaattttggcgaaagctatagccggggaacgttgacg
ccacaattgcgtggtctgttgccgctcggcctacagacgatcatcctcgatggcgagatg
atggtttgggacaccaaccaaaagaggtatcgcgaaaagggcgagaacacggatgtaaaa
aatctaaagcccgatcgaagctggcggccttgttttgtggtctacgatctactgtacttc
aatggccagagtctgctcgatttgacatacatccagcgatcctacaagctccaaaagttg
atcggcgaacagcaaggagtgctgcagctgatgcgcggtaccaagattggctcaatcgag
gaattcaacaaactcttccagcaagcccttgactccaatgccgaaggcattgttctaaaa
aagcagagctccatctaccagccgggagttcgagtcggcgggggatggtacaaggataag
gcagattacatcaagggtctcataaccgaattcgatgttctcatcattggaggcttttat
aatcgcaagcgcacatttatcgattcgtttctactaggcgttctccagccaatggctaat
agcgacagtcgtcatgaggtttacagcattggttgcgttaccaataatacgagacaagca
gtggtgctgaatcatacgctgaggccacactggcacgataccaccaaggagccgccgcca
ctatggtaccattacatggctaacgaaaagattggctccccggatctgtggatcgatcca
cacaattcgattatcttgcaggttaaggcggcggatttgacacccaatagtgccttctat
acgcccaaagctttgcactttccacgcatcgaactgaagcgcgacgataaggcctggaat
gaatgcatgacgctacaggagtttaaccagctgtgtgagggctctggtccgatcaagaaa
ctgaacaagcgtcacctgtgtttggatgatttgaccacgaaacgaaaacgtctacgcatg
acgcccgcagagcgcaggcgtctaggtctggccatatacgagaagcgctacgatgtcggg
acgagttctagctgcacaaaacttttcgaaggccttagtttctgcatcttgagtggtgcg
ccaggccagagcaagcacaaactgcaagaattggcagccaagaatggtggctgcattgtg
gagaatccgctgcccaacgacccgaaatgcttctgtatagcaggagatcagacgttcctg
gtaaagcgactaatgcagcagcaaccatgcaccagcgatattgtgcgcatggagtggctg
atacgcgtctgtcagcagcaagagcttgagctacgtccaaaagatttgctttcggccacc
gagccactacaggatgatttggccgaatggtttgacaaattaggagacagctatacaaag
gactttgcgagcgttgatgaactgctcgaattactacaggacatcggtaaggaggagctt
gccgtcgaccatgtgtcacagtccgaaatcaatgccttcgaagacaagttgctgggccag
gccacacgaaacatattccgtgacttgcatgcctacttctatgatccaaatggcgacgaa
ctgagcaaagttttgttcctgcagaatggcggcacgctggcaagcgaatccgacccccaa
ctaaaccttgtatttgtatgcctgtcttcggatatagacgataattactttgagtcgtgg
ctacataaccatttaagttcgtattctggcgaagtccttaactctgcatggatccatcaa
tcgcaccgtgaacgccgccttctaaaaatgagttgtttttcgtttaaatag
DBGET
integrated database retrieval system