Pseudodesulfovibrio piezophilus: BN4_20321
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Entry
BN4_20321 CDS
T02481
Symbol
hup
Name
(GenBank) SPBc2 prophage-derived DNA-binding protein HU 2
KO
K03530
DNA-binding protein HU-beta
Organism
dpi
Pseudodesulfovibrio piezophilus
Brite
KEGG Orthology (KO) [BR:
dpi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpi03032
]
BN4_20321 (hup)
03036 Chromosome and associated proteins [BR:
dpi03036
]
BN4_20321 (hup)
03400 DNA repair and recombination proteins [BR:
dpi03400
]
BN4_20321 (hup)
DNA replication proteins [BR:
dpi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BN4_20321 (hup)
Chromosome and associated proteins [BR:
dpi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BN4_20321 (hup)
DNA repair and recombination proteins [BR:
dpi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BN4_20321 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
DUF2267
Motif
Other DBs
NCBI-ProteinID:
CCH50383
UniProt:
M1WYK2
LinkDB
All DBs
Position
3438330..3438602
Genome browser
AA seq
90 aa
AA seq
DB search
MTKAELVAKIADKNGSSKAQAEASMNAILDTIKDELAAGSKITLTGFGTFSVSERKARTG
RNPRTGDEIKIPACKVAQFKPGKVLKEAVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagcagaacttgttgcaaaaatcgctgacaagaacggctcctccaaagcacag
gctgaagcttcaatgaatgccattcttgacaccatcaaggacgaactggccgcagggagc
aagattaccctgaccggtttcggcaccttcagcgtgagcgaacgtaaggcccgtactggc
cgtaacccccgtaccggtgatgaaatcaagatcccggcatgcaaggttgctcagttcaag
cctggaaaggttctgaaagaagccgtcaagtaa
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