Danaus plexippus (monarch butterfly): KGM_203821
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Entry
KGM_203821 CDS
T04344
Name
(GenBank) poly A binding protein
KO
K13126
polyadenylate-binding protein
Organism
dpl
Danaus plexippus (monarch butterfly)
Pathway
dpl03015
mRNA surveillance pathway
dpl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
KGM_203821
09123 Folding, sorting and degradation
03018 RNA degradation
KGM_203821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpl03019
]
KGM_203821
03041 Spliceosome [BR:
dpl03041
]
KGM_203821
Messenger RNA biogenesis [BR:
dpl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
KGM_203821
mRNA cycle factors
Stress granule specific factors
KGM_203821
Spliceosome [BR:
dpl03041
]
Complex C
Other components
Complex C specific factors
KGM_203821
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
PABP
RRM_7
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-ProteinID:
OWR53699
UniProt:
A0A212FIZ3
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MNPGPPNYPMASLYVGDLHSDITEAMLFEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPSDAERALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKAIDNKAMYDTFS
AFGNILSCKVAQDENGASKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKER
EKELGEKAKLFTNVYVKNFGEDFSDEMLRDMFEKYGRITSHKVMYKEDGSSRGFGFVAFE
DPDAAERACLELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYV
KNLDDTIDDERLRKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIV
GTKPLYVALAQRKEDRKAHLTSQYMQRMASMRMQQMGQIFQPGSAGGYFVPTIPPAQRFY
GPAQITQMRPSQRWTAQPPVRPSTQTAASAYPNMQAPFRPTTRGPTQTALRTSLGARPIT
GQQGVAAAPSIRAPLVPSGRTAGYKYTSTVRNPPAPQPAVHIQGQEPLTASMLAAAPLQE
QKQMLGERLFPLIQRMHPDLAGKITGMLLEIDNSELLHMLEHGESLKAKVDEAVAVLQAH
QAKQQATKKD
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctggaccaccaaattatccaatggcatcgctatatgtcggggacttgcactcc
gacatcaccgaggccatgttgtttgaaaaattttctcctgctggtcctgttctctctatt
cgcgtatgcagagatatgataactcgtaggtctcttggctacgcttacgtaaattttcag
cagccttctgatgccgaaagagcactagacactatgaattttgatatgatcaaaggtagg
ccaattagaattatgtggtcccaaagagatccatccctccgcaaatctggagttggaaat
gtttttattaaaaatcttgacaaagccatagataacaaggccatgtatgatacattctct
gcttttggcaatatattgagttgtaaggtagctcaagatgaaaatggggcatctaaggga
tatggttttgttcactttgaaacagaagaagctgctaataaatccattgaaaaagtaaat
ggaatgttgctaaatggaaaaaaggtttacgtaggcagatttatccctcgtaaggaacgc
gaaaaggaactgggagagaaagctaaattgttcactaatgtttacgtcaagaacttcggc
gaagatttctcggatgaaatgctaagagatatgtttgaaaaatatggcagaataactagc
cataaagtaatgtataaagaggatggctcatccagaggttttggttttgtagcctttgaa
gatccagatgctgccgaaagggcatgtcttgagcttaatggcaaagaacttgttgaagga
aaacctctatatgtaggacgtgctcagaagaaagctgaacgccaaaaagaactaaagcgt
aaatttgagcagttaaaatctgaacgtttgactcgttatcaaggagttaatctgtatgtg
aagaatttggatgacacaattgatgatgagagactccgtaaggaatttgcaccatttggt
actattacttcagccaaggttatgttggaagatggtcgtagcaaagggtttgggtttgta
tgtttctcatctcctgaagaagctactaaagctgttactgaaatgaatggaagaattgta
ggtactaaacctctttatgtagctcttgctcaaaggaaagaagaccgcaaagctcatttg
acttcacaatacatgcaacgcatggcaagtatgagaatgcaacaaatgggtcaaatattc
caaccaggcagtgctggaggttacttcgtcccaactattcccccagcccaaagattctat
ggccctgctcaaattactcagatgagaccttcacagagatggactgcacagcctcctgta
agacccagcactcaaactgctgcctcagcatatccaaacatgcaagcaccatttagaccc
actacacgtggaccaactcaaacagctttgcgcacttctcttggagctagacctataaca
ggtcaacagggtgtagctgcagcaccatctattcgtgcacctcttgtgccaagcggtcgt
actgctggctacaaatatacatcaactgtgcgcaacccaccagctccacagccagctgtt
cacatccagggtcaagagccattgacagcttccatgttagctgctgcaccacttcaagaa
caaaaacaaatgcttggagaacgtctcttccctctcattcagagaatgcaccctgatctt
gctggcaaaattactggaatgcttctagaaatagataattctgaacttttacatatgtta
gagcatggagagtctcttaaagcgaaggttgatgaggctgttgctgttttgcaagctcac
caagctaaacagcaagccactaagaaagattaa
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