Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_56059
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Entry
DICPUDRAFT_56059 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DICPUDRAFT_56059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpp03019
]
DICPUDRAFT_56059
03009 Ribosome biogenesis [BR:
dpp03009
]
DICPUDRAFT_56059
Messenger RNA biogenesis [BR:
dpp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DICPUDRAFT_56059
Ribosome biogenesis [BR:
dpp03009
]
Eukaryotic type
Pre-60S particles
RNases
DICPUDRAFT_56059
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DUF2605
Motif
Other DBs
NCBI-GeneID:
10502352
NCBI-ProteinID:
XP_003289380
JGI:
Dicpu1_56059
UniProt:
F0ZPP2
LinkDB
All DBs
Position
Unknown
AA seq
187 aa
AA seq
DB search
MSNKQPLDDRSQRIVWVDLEMTGLDITKDCILEMACIITDSELNIIEKGPELVIHRSNEV
LESMNSWCIDHHGKSGLTDRVKNSKITIEEAQLEMFNFIEKHVGKEQAPLAGNSVYQDRK
FLEKEMPLFNNHLHYRIIDVSSIKELARRWYPTELKKAPKKEGSHRALKDIEESIEELKF
YRTAFFK
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataaacaaccattagatgaccgtagccaaagaatagtttgggtggatttagaa
atgacaggtttggatattaccaaagattgtatattggaaatggcttgtattattactgat
tcagaattaaatattattgagaaaggaccagaactcgtaattcacagatctaatgaggtt
ttagaatcaatgaattcatggtgcattgatcatcatggtaaatcaggtttaacagataga
gtcaaaaactcaaaaataacaattgaagaagcacaattggaaatgtttaattttattgaa
aaacatgttggtaaagagcaggcaccattggcaggtaattcagtttatcaagatagaaaa
ttcttagagaaggagatgccattatttaacaaccatttacactacagaattatagatgta
tcttccattaaggaattggcaagaagatggtaccccacagaattaaaaaaagcacctaaa
aaagaaggtagtcatcgtgctttaaaagatatcgaagaaagtattgaagagttaaaattt
tatcgtactgccttctttaaataa
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