Desulfobulbus propionicus: Despr_0784
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Entry
Despr_0784 CDS
T01413
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
dpr
Desulfobulbus propionicus
Pathway
dpr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dpr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Despr_0784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpr03021
]
Despr_0784
03400 DNA repair and recombination proteins [BR:
dpr03400
]
Despr_0784
Enzymes [BR:
dpr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Despr_0784
Transcription machinery [BR:
dpr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Despr_0784
DNA repair and recombination proteins [BR:
dpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Despr_0784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
DUF6090
Motif
Other DBs
NCBI-ProteinID:
ADW16958
UniProt:
A0A7U3YKJ3
LinkDB
All DBs
Position
867887..871960
Genome browser
AA seq
1357 aa
AA seq
DB search
MNRVRKSFAKTSQIIEPPHLIAMQRESYEHFLQRDIAPELRKDHGLQSIFQSIFPITDFN
GLCSLEFVRYSFGEPKYTVAECIERGMTYEAPLKITVRLITFDVDEATGVQSVRDIKEQE
VFLGALPLMTQDGVFVVNGTERVIVNQLQRSPGLFYTHDHGKSHASGKRLYSARIIPVRG
SWLDFEFDIKDILYVRIDRRRKLPVSVLLKALGYGDEQLLNEFYHSDVITCEGEKYSIAF
NAITFANQRLNTDIIHPGDGTIIAKKGKKVTKTLAKKIESLGVASISIDVEELYGRYFAR
DIVNEQTGEVVVKCNDTVTPATLEALAVAGINSFSLLFIDGVNFSESFRKTLLLDKIKDT
DEALIEIYRRLRPSSPPTLEVAKAFFDNLFFNPATYDLSEVGRYKINTKLGVDTPIEVRT
LTQEDIIKSVKYLVRIKDELKDGDDIDHLGNRRVRTVGELCENQFRMGLVRMERAIKERM
TLQEIETLMPHDLVNPKPVTSAIKEFFGTSQLSQFMDQTNPLSEVTHKRRLSALGPGGLS
RERAGFEVRDVHPTHYGRICPVETPEGPNIGLIVSLATYAMVNPYGFIETPYRYVQDRIV
SNEYKYLSALQEEDHVIAPAKIPLDGDRIADDYLIARQESEVAMVAADDITMMDIAPNQM
VSVAASLIPFLENDDANRALMGSNMQRQAVPLLKTSAPLVGTGVEKYVARDSGACLLAGG
DGVVEEADANRIVVRYDQPGVDGFDTGIGVYHLSKYKKSNQNTCFNQKALVLPGQRVVKG
TVLADGPSTEVGELALGKNVTIAFMPWRGYNFEDSILINERLLKEDTFTSVHIEIFETMA
RDTKLGKEEITRDIPNVGEEGLRNLDDSGIVRIGAEVRAGDMLVGKVTPKGESMLSPEEK
LLRAIFGEKAGDVKDSSLRVPPGIEGVVIDAKVFSRKGVDKDERTLMIEEMEIERLNRDM
EAELRSLKNGVRNSLAVLLEGRTAKSDIKDKKGKIILKLGKQLTAKVVSQISFAELHDLD
FSERAKYEDEIDAIFKRYNTQASVVRGRYQGIVERMEKGDDLPPGVVKMVKIYVATKRKL
AVGDKMAGRHGNKGVVSRLLPEEDMPFFADGTTVDIVLNPLGVPSRMNVGQVLECHLGFA
AKRLGEQLSAVAKQKEAARLKQRLAQIYSQEEYARLTEGLSDEELLDMMCKYGHGIHVAT
PVFDGASENEIRQALVEAGVDEVGQSTLYDGLTGEPFDNQVTVGVMYMLKLHHLVDNKIH
ARSTGPYSLVTQQPLGGKAQFGGQRLGEMEVWAMEAYGAAYTLKEFLTVKSDDVEGRTTM
YEKIVKGNNFLETGLPESFHVLVKELKGLCLDIELLE
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atgaacagagtacgtaagagttttgctaaaacaagccagatcattgaaccgccacatctc
attgctatgcagcgggaatcttacgagcactttctgcaacgagatattgcgcctgaatta
cgaaaagatcacgggttgcaatctatctttcaaagcattttccctattacagatttcaac
ggattgtgttcgcttgaattcgttcgttattctttcggagagcccaaatacaccgtcgcc
gaatgtatcgagcggggaatgacctatgaagcacctcttaaaatcaccgtcaggctcatc
acctttgacgtcgatgaggcgacgggggttcagtctgtgcgtgatatcaaggaacaggag
gtattcctcggggctttaccgctcatgacgcaagacggagtgtttgtggtcaacggcacg
gaacgcgtcatcgtaaatcagctgcaacggtcacccggactcttctacacccatgatcat
ggtaagtcccatgcttccggcaaaaggctctattcggcgcgaattattccggtgcggggg
tcttggcttgatttcgaattcgatattaaagatatcctttatgtgcgcatcgacagacgc
cgtaagctgccagtaagtgttctgctgaaagccttgggatatggcgatgaacaattgcta
aatgagttctatcattccgatgtcatcacgtgtgaaggagaaaagtattcgatcgccttc
aacgctatcaccttcgccaatcagcggttgaacaccgacatcattcatcccggcgatggg
actataattgccaaaaaaggcaaaaaggtcaccaagacccttgcgaagaagatcgagagc
cttggcgtcgcctccatctccattgatgtcgaggagttatacggtcgctactttgcccgg
gatattgtcaacgagcagactggagaagttgttgtcaagtgcaacgacaccgtaacaccg
gcaacgcttgaagctctcgccgtggccggaatcaattctttttcccttctgttcattgat
ggcgttaatttcagtgaatcgttccgcaaaacattgctgctcgacaagattaaagatacc
gatgaagcattgattgaaatttatcgtcggctcaggccgtcaagtccaccgaccctggag
gtggccaaggctttctttgacaatctttttttcaatcctgccacttatgatctctccgag
gtaggacggtataaaatcaacaccaagctcggcgtcgataccccgatcgaggtgcggaca
ctgactcaggaagatatcatcaaaagtgtcaaatacctcgttcgaatcaaggatgaattg
aaggatggtgacgatattgatcaccttggcaaccgtcgtgttcgaaccgtgggcgaactg
tgcgagaatcaattccgcatgggcctggtgcggatggagcgagccatcaaagagcggatg
accctccaggaaattgagaccctgatgccgcacgacctcgtcaatcccaaaccggtgacc
tctgcgatcaaggaattttttggtaccagccaactttcccagttcatggatcaaaccaat
cctctttccgaggtaacccataagcgcaggctttctgcgctgggcccaggcggtctttct
cgggaacgcgctggtttcgaagtgcgtgacgttcatccgactcattatggccggatttgt
ccggtagaaacccctgagggaccaaatatcggcctgattgtcagcttagccacctatgcg
atggtgaatccgtatggatttatcgagactccgtatcgctatgtccaagatcgaattgtt
tcgaatgaatacaagtacctgtctgccttgcaagaagaggatcacgtcatcgctccggcg
aaaattcctttggatggcgaccgaatagccgatgattatttgatagcccggcaagaaagt
gaggtggccatggtcgccgctgacgatatcacgatgatggatatcgctcccaaccagatg
gtttcggttgcggcctcgttgatccctttccttgagaatgacgacgccaaccgcgcattg
atgggttccaacatgcagcgacaggcagtgccgttgctgaaaaccagcgcgcccctggtt
gggaccggcgtggagaaatatgtagctcgtgattccggtgcctgtctgttggcaggcgga
gacggcgtggttgaggaggcggatgctaatcgcatcgtggtgcgatatgatcagccagga
gtggatggatttgatacgggtattggtgtctatcatttgtccaagtataaaaaatccaat
caaaacacatgctttaatcaaaaagctcttgtgcttcctgggcaacgtgttgtgaagggg
acagtcttggcagatggaccgtccacggaagtcggagaactcgctttgggaaaaaatgtg
accatcgcgttcatgccctggcgaggctacaactttgaagattccatcctgatcaatgag
cgtttacttaaagaagataccttcacctccgtgcatattgaaatctttgaaacaatggca
cgggataccaagttgggaaaagaagagattacccgcgatattcccaatgtcggtgaggaa
ggactccgtaatctcgatgattccggtattgtccgcatcggggctgaggttcgcgccggt
gacatgctggtcggcaaggtcactccgaaaggcgagagtatgctttcgcctgaagaaaaa
ttgctccgggcgatttttggcgagaaagccggtgatgtaaaagattcctccttgcgggta
ccgccgggaatcgaaggagtggtgatcgacgccaaagtcttttcgagaaagggagtcgac
aaagacgagcggacgctgatgatcgaggaaatggagatcgaacgcctcaatcgggacatg
gaagccgagctgagaagtttgaaaaacggcgtgcgcaactccctggctgttcttctcgaa
ggtcggacggctaaaagtgatatcaaggacaagaaaggaaagatcatccttaaattaggc
aaacaactcaccgccaaggttgtctcccaaattagtttcgccgaactccatgacttggat
ttttcggaaagagccaagtatgaggacgagattgacgcgatcttcaaacgctacaatacc
caggcctccgttgttcgcgggcgttatcagggcattgttgagcgtatggaaaaaggagat
gatctgccccccggcgtggtgaaaatggtgaaaatctatgtggccaccaagcgtaaactg
gcggttggcgacaaaatggcggggcgtcacggcaataaaggtgttgtttcacgtctgctt
cccgaggaggatatgcccttttttgccgatggaactactgtcgatattgtgctcaatccc
cttggcgtgccttcgcgaatgaatgttggccaggtgcttgaatgccatcttggttttgcc
gccaaaaggctgggagaacaactctcggctgtagcgaaacagaaggaggccgcacggctc
aagcaaaggttggcgcagatttattcccaagaggagtatgctcgattaactgaaggactc
agcgacgaggaattactcgacatgatgtgcaagtacggccatggcatccatgtggccact
ccggtgttcgacggtgcttcagagaatgagatacgccaggctctcgtggaagcgggtgtc
gatgaggtcgggcagtcaacattgtacgacggcctgaccggtgaaccttttgataaccag
gtaacggtgggcgtgatgtatatgcttaagctgcaccatctggtggacaacaaaatccac
gcccggtcaaccggtccctattcacttgtcactcaacagcccctcggcgggaaagcgcag
ttcggcggccagcgtttgggtgagatggaggtttgggccatggaggcctatggggcggcc
tacaccctcaaagaattcttgacggtgaaatcggacgatgttgaaggccggacgacgatg
tatgaaaaaatcgtcaaaggaaacaatttcttggaaacagggttgcctgaatcattccat
gttctcgtcaaggaattgaaagggctctgcctcgatatcgaattgctcgagtaa
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integrated database retrieval system
