KEGG   Daphnia pulex (common water flea): DAPPUDRAFT_328912
Entry
DAPPUDRAFT_328912 CDS       T04347                                 
Name
(GenBank) hypothetical protein
  KO
K12828  splicing factor 3B subunit 1
Organism
dpx  Daphnia pulex (common water flea)
Pathway
dpx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dpx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    DAPPUDRAFT_328912
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dpx03041]
    DAPPUDRAFT_328912
   03036 Chromosome and associated proteins [BR:dpx03036]
    DAPPUDRAFT_328912
Spliceosome [BR:dpx03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    DAPPUDRAFT_328912
 Complex B
    DAPPUDRAFT_328912
 Complex C
   U2 SnRNP specific factors
    DAPPUDRAFT_328912
Chromosome and associated proteins [BR:dpx03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    DAPPUDRAFT_328912
SSDB
Motif
Pfam: SF3b1 HEAT_EZ Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG DUF3385 CEP104-like_TOG
Other DBs
NCBI-ProteinID: EFX69656
JGI: Dappu1_328912
UniProt: E9HF38
LinkDB
Position
Unknown
AA seq 1326 aa
MLGFGYMLLVMLIVATISIAENSRTHEEIAAQVQEIQSRSKVDISEKDRIGFGESGIFDS
EIYGEVQSRFDGYVTSIATTDEVEEEDYDGAVTTGGRQTFTAPAAILNEVAGEDFDPFAE
HRRPTIADREDEYRAKRRKLIISPERVDPFAEGGKTPDVGSRTYAHIIREQQLRAEEQEV
RRKLADKAKDGTLKAVSVPSNGESNEAPRKRAARWDQTGEGDTGPAATPVAAPAVPTVKK
KTWEVETPAVARWDETPSRSKGSETPAAGGVTPGSRLWDATPGHDDSRKRNRWDETPKTE
RAGEFTPGFGSGWAETPRTDRGGDTIQETPTPSASKRRSRWDETPANSSATPSGGMTPQT
PSLSGAMTPRMTPGGATPIGQKAMAMATPTPGHLVTMTPEQLQAYRWEREIDERNRPIGD
DELDGMFPEGYKILPPPAGYIPLRTPARKLTATPTPLAGANSGFYMQQEDKTASKYMDTQ
PKGGNLPFLKPEDAQYFDKLLIDVDEDSLSPEELKERKIMTLLLKIKNGTPPMRKSALRQ
ITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVI
EPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASA
LGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRNLVEIIEHGLVDEQ
QKVRTITALSIAALAEAATPYGIESFDSVLKPLWKGIRTHRGKGLAAFLKAIGYLIPLMD
AEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCATDGVEPQYIKTEILPHFFKSF
WNHRMALDRRNYRQLVDTTVEIANRVGAAEIIGRVVDDLKDENEQYRKMVMETVEKIMGN
LGAADIDARLEEQLIDGILYAFQEQTTEDVVMLNGFGTIVNSLSKRVKPYLPQICGTILW
RLNNKSAKVRQQAADLISRIAAVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILAALK
AIVNVIGMHKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRI
CFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAI
VAETCSPFTVLPGLMNEYRVPELNVQNGVLKSMSFLFEYIGEMGKDYIYSVTSLLEDALM
DRDLVHRQTACAAIKHMALGVFGFGCEDALTHLLNYVWPNIFETSPHLVQAFMDAVEGMR
VALGPIKVLQYALQGLFHPARKVRDVYWKIYNSLYIGGQDSLVCGYPRVSNEGKNTFNRY
ELDYVL
NT seq 3981 nt   +upstreamnt  +downstreamnt
atgctaggatttggatacatgctgttggtgatgctcatcgtggcaactatcagcattgcc
gaaaactctcgcactcacgaagaaattgcagctcaagttcaggaaatccagtcaaggagc
aaggtagatatatctgaaaaagatcgcatcggatttggcgaatcaggcatttttgattca
gaaatctacggtgaagttcaaagtcgatttgatggatatgtaacttcaattgccacaact
gatgaagttgaagaagaagattatgatggagcagttaccactggaggcaggcaaactttc
acagcaccagctgcgattctcaatgaagtggcaggagaagactttgacccatttgctgaa
catcggagaccaactattgctgacagagaagatgaatacagagcaaagcgtcggaagttg
attatttccccagaacgtgttgatccatttgctgaaggcggtaaaaccccagacgttgga
tctcgcacttacgctcatattattcgtgaacaacagttgcgcgcagaagagcaagaggtc
cgccggaagcttgccgacaaagctaaggatggtaccttaaaagctgtatcggtaccatca
aacggtgaatcaaatgaagcgccacggaagcgtgcagcccgttgggatcaaacaggtgaa
ggtgacacaggtcctgctgccactccagttgcagcaccagctgttcctacggtaaagaag
aaaacctgggaagtggaaacgccagcagtagctcgttgggatgaaactccttctcgctcc
aaaggctctgaaaccccggcagctggaggtgttacccctggaagtcgtctgtgggatgct
acgccgggacatgatgactcgcgcaaacggaatcgctgggacgaaacaccgaaaactgaa
agagccggcgaatttactcctggttttggttctggttgggctgagacaccacggacagat
cgtggaggagacacaatccaggagacaccaactccttcggcatcgaaacgtcgcagccgt
tgggatgaaacaccagctaattccagtgcgacaccgtctggtggaatgactccgcaaact
ccttcactatctggagctatgactccaagaatgacaccgggtggagctactccaatcgga
caaaaagctatggccatggctaccccaactccaggacaccttgttaccatgactcctgaa
caactacaagcataccgatgggaaagggaaatcgacgagagaaaccgcccaattggtgat
gatgaactagacgggatgtttccagaaggctacaagatcctgcctcctccagctggatac
attcctctgcgtactccggcacgcaaattaactgcaactcccactccattagctggggcc
aattcgggattctacatgcaacaagaagataaaactgcctcaaaatacatggacacacaa
cctaaaggcggtaacttgccctttttgaagccagaagatgcccaatatttcgacaagcta
ttgattgatgttgatgaagattcattgagcccagaagagctaaaggaacgaaaaatcatg
actcttttacttaaaatcaagaacggtaccccacctatgcgtaaatctgcattaagacaa
atcacggataaggctagagaattcggagctggtccacttttcaatcaaatccttccttta
ttgatgtctccgaccctagaagaccaagagcgtcatttgctcgttaaagttatcgatcgc
attctctacaaattggatgatctagtgcgtccctacgtccacaaaatccttgtcgttatt
gaaccgctgctaattgacgaagactattatgctcgtgttgaaggtcgagaaatcatctct
aatttagctaaagcagctggtttagcaactatgatttctaccatgagacctgatatcgat
aacattgatgaatatgttcgtaacactactgcaagagcttttgctgtggtagcttctgca
ctgggaattccttcccttcttccctttctaaaggccgtttgcaagagtaaaaagtcatgg
caggctcgccatactggcatcaaaatcgtccaacaaattgctattcttatgggatgtgct
attttacctcacttgcgaaatctggtagagatcattgaacatggactggtagatgagcaa
cagaaagtgcgcaccatcacagccttgtccattgctgccctggctgaagccgcgactccg
tacggtattgagagctttgactccgttttaaaaccgttgtggaagggtataagaactcat
cgtggtaaaggattggctgctttccttaaggctattggctatttgatccctctcatggat
gccgaatacgccaattactacactcgcgaagtgatgttaattttaattcgcgagtttcag
tcacctgacgaagaaatgaaaaagattgtacttaaagtggtgaaacagtgttgcgcaact
gacggtgtggaacctcagtatattaaaacagaaattttgccacatttcttcaaaagtttc
tggaatcatagaatggcattagatagacgtaactatcgccagctagttgacacaacagtt
gaaatcgcaaatcgtgttggtgcagcggaaattattggccgagtggttgacgatttaaag
gacgaaaatgaacaataccggaaaatggttatggaaacggtcgagaagatcatgggtaat
cttggtgccgctgatatcgacgctcgcttggaagagcagctcatcgacggtattctctac
gcatttcaggaacaaacgactgaagatgttgtgatgctaaatggattcggtacaatcgtg
aactcactttccaaacgagttaaaccttatttgccacaaatttgtggtactattttatgg
cgtttgaacaacaaatcagcaaaagttcggcaacaagctgctgatttaattagccgtatt
gcagcagtaatgaaaacttgtcaggaagaaaagctcatggggcatctgggagttgttctc
tatgaatatcttggcgaagagtaccctgaagttcttgggtctattttagctgctctcaaa
gctattgttaacgtaattggcatgcataagatgacaccgccaatcaaagatttacttccc
cgattaacacctattttgaagaatcggcatgaaaaagtacaggaaaattgcatcgatttg
gttgggcgtattgccgatcgtgggccagagtacgtttcagctcgagagtggatgcgcatt
tgttttgagcttttagaactcttgaaagcacacaagaaagccattcgacgagctacagtc
aacacttttggttatatcgccaaagcaattggcccacacgatgtattggctacactgctt
aataatttgaaggttcaggagcgccaaaatcgtgtttgtacaaccgttgccattgcaatt
gtggctgaaacttgttcgcccttcaccgtcctccctggtcttatgaacgaatatagagtc
ccggaacttaatgttcaaaatggtgttttgaagtcgatgtcgttcttgttcgagtacatt
ggcgagatggggaaggattacatttattcagttacatcgctcttagaagacgctttgatg
gatcgtgacctggtccatcgtcaaactgcttgtgcagccatcaagcacatggctttgggt
gttttcggctttggttgtgaagatgcccttacacacctgttgaactacgtttggcccaac
atttttgaaacttcccctcatttggttcaagcttttatggatgcagtggagggtatgaga
gtagcccttggccctattaaagtcttacaatacgcactgcagggtctgtttcatccggcc
cggaaagttcgtgacgtgtattggaagatttacaactcgctctacatcggcggtcaagat
tcactggtgtgtgggtaccctcgagtgtccaacgaagggaaaaacacttttaatcgttat
gaactcgattatgtattgtaa

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