KEGG   Dinoponera quadriceps: 106744231Help
Entry
106744231         CDS       T05610                                 

Definition
(RefSeq) histone deacetylase 6 isoform X1
  KO
K11407  histone deacetylase 6 [EC:3.5.1.98]
Organism
dqu  Dinoponera quadriceps
Brite
KEGG Orthology (KO) [BR:dqu00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:dqu01009]
    106744231
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dqu03019]
    106744231
   04131 Membrane trafficking [BR:dqu04131]
    106744231
   03036 Chromosome and associated proteins [BR:dqu03036]
    106744231
Enzymes [BR:dqu01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     106744231
Protein phosphatases and associated proteins [BR:dqu01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     106744231
Messenger RNA biogenesis [BR:dqu03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     106744231
Membrane trafficking [BR:dqu04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    106744231
Chromosome and associated proteins [BR:dqu03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     106744231
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl zf-UBP zf-UBP_var Spindle_Spc25
Motif
Other DBs
NCBI-GeneID: 106744231
NCBI-ProteinID: XP_014474298
LinkDB All DBs
Position
Unknown
AA seq 1185 aa AA seqDB search
MDENIKKAGLFAAAKHLADSEVELIKVIGNSSKYQNQRTAGNMPANGKKMKKPGKSENVH
PSPALLAAKREAAQRQLLLGKKLNNNFVRDIYQKATDAYETVRKDTGLVFDQSMTEHECL
WDPDYAECPARFTRVLQRCEELGLVQRCKLIKARLATESEILMKHSQKHIDILKATDGCT
DSENLELLSSKYDSIYVHPSTYKLSLLATGSTINLVESICKGKMQNGMAIVRPPGHHAMK
SEYCGYCFFNNVALAAEKALSSNWASRILIVDWDVHHGQATQQMFYNDPRVVYFSIHRYE
YGEFWPNLRESDFHNIGEDLGEGYNFNIPLNKTGMTNADYIAIFQQVLLPMAYEFQPDLV
IVSAGYDAALGCPEGEMLVTPACYSHLLSSLLSLAAGKVAVVLEGGYCLKSLAEGAALTL
RTLLGDPCPVLQTLELPSLSIRDTILNVIYAHRQYWNCYQYQDSHSINTVTHNKEEIANQ
HVVTVTYKGSPTKPEKYETRNCYPKLNKEIFEALDKKLNELIQFTNLYKAPHKVCIVYDE
RMLKHCNISDSSHPEMPTRISSIYRNHEEHGLLERCHLLHGRNATMEELSLVHSKDYIDR
IKNTATMKRKELEEEAAGYISIYLHKETWPSACMSAGSLLQVVDVVLNGECQSGVAIVRP
PGHHAEDDDAYGFCIFNNVAVAARYAIQFHHVKRVLIVDWDVHHGNGTQSIFEEDPRVLY
ISVHRYDNGSFFPNTKDGNYTSVGLDAGEGFNVNVPWNKRGMGDAEYIAAFQQVVMPIAY
QFDPELVLISAGFDACVGDPLGGCHTSPELYGHLTHWLSSLANGRIILSLEGGYNINSIS
HAMTMCTKALLGDPLPMLEPGQVPCTSAINSINNVLKIHKKFWPNLQYDMSLPKERLLPK
LKLTSKRESSKRDKRLEERGKNAEKPKQTESKIALEGIESEKLELCLSIDKNCLNLVTDE
EILKLRNEVENIKIKNCEIDTIKGDSDETRRNVGSKKNEAKNPDVSQSIQKCVNETKQSR
DNQQGSSSIHNDHDEEGAAALQRETRATNLLDYLSDHLQALTAGEMFAVVPLRDCPHLSA
VNEVPPNGIDVTLPCTECTSTAENWICLQCYTVHCARNVNQHAMQHAEECEHPIALSFAD
ISVWCYGCEAYIDNPRLYPARNAAHQSKFNEALPWTYNGSSTHAS
NT seq 3558 nt NT seq  +upstreamnt  +downstreamnt
atggatgaaaatataaagaaggctggtttatttgctgctgccaaacatttagcagatagc
gaggttgagttaataaaagtaattggaaactctagtaagtaccagaatcaaagaactgct
ggcaatatgcctgctaatggaaagaaaatgaaaaagcctgggaaatcagagaatgtccat
ccttctccagcattattagctgctaaacgagaagcagcacagcgacagcttttgttagga
aagaaattaaataacaattttgtacgagatatatatcagaaagccactgatgcgtatgag
acagtgcgcaaggacactggtcttgtatttgatcagagcatgacagagcatgaatgtctt
tgggatccagattatgccgaatgtccagcaaggtttacgcgagtcttacagagatgtgaa
gaattaggtttggtgcaacggtgtaaactcatcaaagcaagactggcaacagagagtgag
attttgatgaaacatagtcaaaagcatattgatattctgaaagccacagatggctgtaca
gactctgaaaacttggaactgttgtcgtccaaatatgactctatctatgtgcatccatct
acgtataaattgtctttactggctacaggctcaacaattaatttggtagaaagcatctgc
aagggtaaaatgcaaaatggtatggctattgtcagaccaccaggccatcatgcgatgaaa
tcagagtattgtggttactgcttcttcaataatgtagcactcgcagcagagaaagctctg
tcttcaaattgggcgagtagaattttaattgtcgactgggatgttcatcacggacaagcg
acacaacaaatgttttacaatgacccacgtgtagtctatttttcgatacatcgttatgaa
tatggtgaattttggcccaatctaagggaatctgattttcataatatcggagaagatctc
ggagagggttacaatttcaatatacctctgaacaaaactggcatgacaaacgctgattat
atcgccatttttcagcaagttttactaccaatggcttatgaatttcaaccggatctggta
atagtgtcagctggttacgacgctgctctcggttgtccagagggtgagatgttagtgact
cctgcgtgttattcgcatctactttcatcattattaagtctggcagctggaaaagtcgcc
gtcgttttggagggtggttattgtttgaaatctttagctgaaggagcagcactgacttta
aggactttgttgggtgacccatgtcctgttctccaaacgctcgagttaccctcattgagt
atacgagataccattttgaatgtaatctacgcacaccgacagtactggaactgttatcag
tatcaagactcacatagcattaacaccgtgacccacaacaaagaggagattgctaatcaa
catgtagttacagttacatacaagggcagtccgactaaaccggaaaagtacgagactcga
aattgctaccctaaattaaacaaagaaattttcgaagcactggataagaaactgaacgaa
ttaatacaatttactaatttatacaaagcaccgcataaggtatgcatcgtctacgacgaa
aggatgctaaagcactgcaatatttctgacagttctcatccggaaatgccaactcgtatc
tccagcatctacaggaatcacgaggagcatggtttgctagaacggtgccacttattacac
ggaagaaacgcaacgatggaagaactatctttggttcattcgaaagattacatcgaccgt
atcaaaaatacggcgacaatgaaacgtaaggaattagaggaagaagccgctggttacatt
tccatttatctccataaagaaacatggccaagtgcctgcatgtctgccgggtccctcttg
caagtagtggacgtggttttgaacggggagtgtcagtccggagtagcaatcgtaagacct
ccgggacaccatgccgaggatgatgatgcatatggtttttgtatattcaataacgtggct
gtagctgcaagatatgccatacaatttcatcatgtaaaaagggtgcttatagtagattgg
gacgttcatcatgggaacggaactcaatctattttcgaagaagatccgagagttctgtat
atatctgtccatcgttacgataatggaagcttcttcccgaataccaaggatggcaattat
acgagcgttggcttggacgcaggcgagggattcaacgtaaatgtaccgtggaacaagagg
ggaatgggagatgccgagtacatagcagcattccagcaggttgtaatgcctatcgcttac
caatttgacccggagctggttctgatctccgctgggttcgatgcttgtgtgggtgatcca
ctgggaggttgccacacgagtccagaactctatggtcatttgacccactggctctcatcc
ttggccaacggtcgtataatcctcagtctcgaaggaggctacaacatcaactccatctct
cacgcgatgactatgtgcaccaaagcccttctaggcgaccccttgccaatgctagaaccc
ggtcaggtaccctgcaccagcgcgatcaactccatcaacaacgtgttgaaaattcataag
aaattctggcccaatctgcaatacgatatgtccttgccgaaggaaaggctgcttcctaaa
ctcaagttgacttctaagagggaatcctcgaagagggacaagaggctcgaagagcgagga
aagaatgcggagaaaccgaagcaaacggagtcgaagatcgccttggaggggatcgagagc
gaaaaactggaactgtgcctgtcgatcgataagaactgcctgaacctcgtgacggacgag
gagattctgaagttgaggaacgaagtggaaaacattaaaattaagaattgcgaaattgac
acgataaaaggtgactccgacgagacgaggaggaacgtcggctcgaaaaagaacgaagcg
aaaaatccggatgtttcgcagagtatacaaaaatgtgtgaacgaaacgaaacagtcgagg
gacaaccagcaggggagttctagcatacacaacgaccacgacgaggaaggagcggcagcg
ttgcaacgtgagacacgagctacgaacctcctggactatctttccgatcatcttcaggct
ctgacagcgggggaaatgttcgcggtggtgcctctgcgagactgtccacacctgtccgcg
gttaacgaagttcccccgaatggaatcgacgtcactctaccctgcacggagtgcaccagc
accgcggagaattggatctgcctgcagtgttacaccgtgcactgcgctcgcaacgtcaat
cagcacgcgatgcagcatgcggaggagtgcgagcaccctatcgcccttagcttcgccgac
atctctgtctggtgctacggttgcgaagcgtacatcgataatccccgattgtacccagcg
agaaatgcggctcatcaaagcaaatttaacgaagcgcttccctggacttacaacgggagt
agcacgcatgcatcttaa

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