Draconibacterium halophilum: G0Q07_18335
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Entry
G0Q07_18335 CDS
T06417
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
drc
Draconibacterium halophilum
Pathway
drc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
drc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G0Q07_18335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
drc03019
]
G0Q07_18335
Enzymes [BR:
drc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
G0Q07_18335
Messenger RNA biogenesis [BR:
drc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G0Q07_18335
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF3040
UTP25
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QIA09545
UniProt:
A0A6C0RIV5
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All DBs
Position
4490719..4492038
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AA seq
439 aa
AA seq
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MKKTFEDLKVAKSILKSLDDIGFTTPTPIQEKAIPKINSGVNIVGVAQTGTGKTAAYLLP
LLTRLRKPEGTDPRVVVIVPTRELAIQVGEDIAELISYSELRHAAVFGGIGWTKHAALLE
PGIDILVATPGRMWDLYQAGALRLKKVKYLVIDEADRMLDLGFMPQIQQLQEILPSRRQN
LLFSATFSEKIETLAEDFLDHYDKLEIAPSATPVGLVTQICYKVPNYRTKLNLIKYLLED
AENFSRVVIFVKTKEHAEGVYKVVQRKAEGEKRILHSNKSQNSRINSIQAFKKGEVRILI
TTDVSARGMDVSQVSHVINFDLPNDYDDYIHRIGRTARAGNKGDAITLIDPAAEWHWKHI
ESLMRKEIKLLDLPKEVEVAESESKEEQDMLREIDRQRKIEDPSFQGAFHQKKRKGSSKR
SFEDKFSRTKERQKRKKRR
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagacttttgaagatttaaaagttgcaaaatcaatattaaaatcgcttgacgat
attgggtttactacaccaacgcccatacaagagaaagcaattccgaagattaattcagga
gttaatattgtaggagtagcgcaaaccggtaccggcaaaactgctgcctatctgcttccc
ctgcttacgcgattaagaaagccggaaggaacagatccacgagttgtagtgattgttccc
acacgcgaattggccattcaggtcggtgaagatattgctgaattaataagttactctgaa
ttacgccatgctgcagtatttggcggtattggctggacaaaacatgctgccctgctcgaa
ccgggcatcgatattcttgttgctacacccggccgcatgtgggatttataccaggcagga
gctttacgcttaaagaaagtgaaatacctggttatcgacgaagccgaccgcatgctggac
ttgggatttatgccacaaatccaacagctacaagagatcctgccgtcacgcagacaaaac
cttttattttcggctacattttcggaaaaaatagaaacgcttgccgaggattttctcgac
cattatgacaaacttgaaatagcaccctcggcaactccggttggtctggtaacacaaatt
tgttataaggttccgaattacagaacaaagctcaatctgatcaaatacctgcttgaagat
gcagaaaactttagccgcgtagttatttttgtaaaaacaaaagaacatgccgagggagtg
tacaaagttgttcagcgaaaagcagagggagaaaagcgtattctccattctaacaaatca
caaaactcgcgtataaattctatacaggcatttaaaaagggtgaggttcggatactcatt
actaccgatgtttcggcacgggggatggatgtgagccaggtgagccacgttataaatttc
gatctgccgaatgattacgacgattatattcaccgaattggccgaactgcgcgtgctggg
aataagggtgatgccattacattaatcgacccggccgctgaatggcactggaaacatatt
gaaagtttaatgcgcaaagagattaagcttcttgatttgccaaaagaggttgaagtggcc
gaatcggaatctaaagaagaacaggatatgttgcgcgaaatcgatcggcagcgcaaaatc
gaagatccgtctttccagggagcttttcatcagaaaaaaagaaaagggtcttccaaacgt
tcttttgaagataagttttcgcgcactaaagagcgtcaaaaaagaaagaaaagaagataa
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