KEGG   Danio rerio (zebrafish): 100170813Help
Entry
100170813         CDS       T01004                                 

Gene name
galnt18a
Definition
(RefSeq) UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18a
  KO
K00710  polypeptide N-acetylgalactosaminyltransferase [EC:2.4.1.41]
Organism
dre  Danio rerio (zebrafish)
Pathway
dre00512  Mucin type O-glycan biosynthesis
dre00514  Other types of O-glycan biosynthesis
dre01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:dre00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00512 Mucin type O-glycan biosynthesis
    100170813 (galnt18a)
   00514 Other types of O-glycan biosynthesis
    100170813 (galnt18a)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:dre01003]
    100170813 (galnt18a)
Enzymes [BR:dre01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.41  polypeptide N-acetylgalactosaminyltransferase
     100170813 (galnt18a)
Glycosyltransferases [BR:dre01003]
 O-Glycan biosynthesis
  Mucin-type
   100170813 (galnt18a)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Glycos_transf_2 Ricin_B_lectin Glyco_tranf_2_3 Glyco_transf_7C 4HB_MCP_1
Motif
Other DBs
NCBI-GeneID: 100170813
NCBI-ProteinID: NP_001124120
ZFIN: ZDB-GENE-080723-30
Ensembl: ENSDARG00000100889
Vega: OTTDARG00000039355
UniProt: B3DHD4
LinkDB All DBs
Position
25
AA seq 609 aa AA seqDB search
MACTRRTKTLVSTCVILSGMTNILCLLYVGWITNYVSNNGNVKVAGRTHEKKFDDDSKGE
TLRIIERLDRLESVVNQHIQEKPQSDIEDSADLSLSETLFAHWGHELGPESRKVALRKFQ
YYGYNAYLSDRLSLDRAVPDLRPDGCRNISYPTGLPQVSIIFIFVNEALSVILRSVHSVI
QRTPAHLLKEIILVDDHSNNAELLENLQRFVDETNQQQRDFIKVVHHEKQEGLIRSRVSG
WRAASAPIVALFDAHVEFSIGWAEPILHRIQEDRTRAISPSFDNIKYDTFEIEEYPLSAQ
GFDWELWCRYLNPPKSWWMQKNQTAPIRSPALIGCFVVDREYFEEIGLLDEGMEVYGGEN
VELGIRVWLCGGSVEVIPCSRIAHIERAHKPYTEDLATHVRRNALRVAEVWMDEFKSHVY
MAWNIPQQDSGIDIGDIRDRKALRERLRCKPFSWFLNNIYSEMRTYMDTIAYGVLRNSLR
PDLCVDQGPDSDNIPILYICHGLTPQNVYFTSSQQLHVGGLSPTIDDDDNKCLVDVNSRP
RLLECSYASNKHMKLSWLFTQGGSIQNKKSKRCLELVESADVDHGYQLVLQKCSSQKWTI
THILPGKVL
NT seq 1830 nt NT seq  +upstreamnt  +downstreamnt
atggcatgcacgaggagaaccaaaactttggtgtccacgtgcgtgattttaagtggcatg
accaatattctgtgcctgctgtacgtcgggtggatcaccaattatgtgtctaataacggc
aacgtcaaagttgcaggaaggacgcacgagaaaaagtttgacgatgacagcaaaggggaa
accttgaggattattgaaagactggacagacttgagagtgttgtaaatcaacacatccaa
gagaagccacagtcagatatcgaggactctgctgacctgtcactctcagagactttgttt
gcacactggggacatgagctggggccagagagccgaaaggtggccctcagaaagttccag
tactacggctataatgcctacctcagtgacagactctctttggacagagccgtgccagac
ctcagacctgacggctgcagaaatatctcatacccgacaggtctgcctcaggtcagcatc
atcttcatctttgtgaatgaggctctgtctgtgatcctgcgctctgttcattcagtgatt
cagaggacacctgctcacctgctgaaggagatcatcctcgtggacgaccacagcaacaac
gcagagctgctggagaatctgcagagatttgtggacgagaccaatcagcagcagcgtgac
tttattaaagtggtccaccatgagaagcaggagggattgattcgctctcgggtcagtgga
tggagagctgcaagtgccccaatcgtcgccctgtttgatgcccatgttgagttcagcatt
ggctgggctgaacctattcttcaccgcatccaagaggaccgaacgcgggccatctcgcca
tcatttgacaacatcaaatacgacacgtttgagattgaagagtatccactctctgctcaa
gggtttgactgggaactgtggtgccgttatttaaaccctcccaaatcctggtggatgcaa
aagaaccaaaccgcaccaatcaggagtcctgctctgatcggctgctttgtagtggatagg
gagtattttgaggagattggcctgctggatgaagggatggaggtttacggcggggagaac
gtggagctggggatcagggtttggttgtgtggaggaagtgtggaggtcataccctgctcc
agaatagctcatattgaacgcgcacacaagccctacacagaggatctggcaacccatgtg
cgcaggaacgctctaagggtggctgaggtatggatggatgagttcaagagccacgtttac
atggcctggaacattcctcaacaggactctgggattgatatcggtgatatcagagaccga
aaagctctcagagaaagactccgctgtaaacctttcagctggttcctcaacaatatttat
tctgagatgagaacctatatggacaccatcgcttatggtgtactgaggaacagcctgagg
ccggatctttgtgtggatcaaggtcccgactccgacaacattcccattctgtacatctgc
catggcctgacgcctcagaatgtgtacttcacaagctctcaacagttgcatgtcggagga
ttgagtccaactattgatgatgatgacaacaagtgcctggtggacgtgaacagccgacca
cgactgctggaatgcagctacgccagcaacaaacatatgaaactctcctggcttttcacc
cagggaggctccattcagaacaaaaagtcgaaacgttgtttggagttggtagaaagtgca
gatgtggatcatggatatcagctggtccttcagaagtgcagcagtcagaaatggacaatc
acccacatattgcctgggaaagttttatag

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