KEGG   Danio rerio (zebrafish): 100310831Help
Entry
100310831         CDS       T01004                                 

Gene name
galnt18b
Definition
(RefSeq) polypeptide N-acetylgalactosaminyltransferase 18 isoform X1
  KO
K00710  polypeptide N-acetylgalactosaminyltransferase [EC:2.4.1.41]
Organism
dre  Danio rerio (zebrafish)
Pathway
dre00512  Mucin type O-glycan biosynthesis
dre00514  Other types of O-glycan biosynthesis
dre01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:dre00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00512 Mucin type O-glycan biosynthesis
    100310831 (galnt18b)
   00514 Other types of O-glycan biosynthesis
    100310831 (galnt18b)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:dre01003]
    100310831 (galnt18b)
Enzymes [BR:dre01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.41  polypeptide N-acetylgalactosaminyltransferase
     100310831 (galnt18b)
Glycosyltransferases [BR:dre01003]
 O-Glycan biosynthesis
  Mucin-type
   100310831 (galnt18b)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Glycos_transf_2 Ricin_B_lectin Glyco_tranf_2_3 Glyco_transf_7C CDtoxinA
Motif
Other DBs
NCBI-GeneID: 100310831
NCBI-ProteinID: XP_003199061
ZFIN: ZDB-GENE-091014-1
Ensembl: ENSDARG00000059438
Vega: OTTDARG00000041243
UniProt: E7F4H6
LinkDB All DBs
Position
7
AA seq 609 aa AA seqDB search
MACTRRTKTLVSTCVILSGMTNIVCLLYVGWVTNYIANVYIKVPVPVPAKKLEGDRKGET
LRIIERLDRLENVVNQHIQESPLKGDDNQVDRSFADSSLFNHWGQDLGPESRRVALKMFQ
YYGYNGYLSDRLSMDRAIPDYRPDGCKNMSYPSNLPQVSIVFIFVNEALSVILRSIHSVM
NRTPSHLLKEIILVDDNSNNDELKEKLQDFVKETNAKQPGFIKVVRHSRQEGLIRSRVSG
WRAASAPVVALFDAHVEFNIGWAEPILQRIKEDRTRIISPSFDNIKYDTFEIEEYPLSAQ
GFDWELWCRYLNPPKSWWNLNNSTAPIRSPALIGCFVVDRLYFAEIGLLDEGMEIYGGEN
VELGVRVWQCGGSVEVLPCARIAHIERAHKPYTEDLTAHVRRNALRVAEVWMDEFKSHVY
MAWNIPQEDSGIDIGDIAERKALRKKLQCKTFRWYLVNIYPEMRMYTDTVAYGVLRNSLK
TDLCLDQGPDTDNIPILYLCHGMTPQNVYYTSTQQLFVGILSPTVDDDDNKCLVDVNGRP
RLIECSYAVAKRMKLHWRFTQGGSIQNTKSKRCLELVENNDNEFGFQLTLQKCTGQNWTI
TNMLPGSTL
NT seq 1830 nt NT seq  +upstreamnt  +downstreamnt
atggcttgcaccagaagaaccaaaactttggtgtctacgtgtgtgatactaagtggcatg
accaacattgtgtgtcttttgtacgtcggatgggtgactaattacatcgctaatgtgtac
atcaaagtgccggtgcctgtcccggccaaaaagttggaaggcgacaggaaaggagaaact
ctgcggattatagagcgactggatcggctggagaatgttgtcaatcagcatatacaagag
tcgccactgaaaggagatgacaatcaagtggatcgatcttttgctgactcatccttgttt
aaccactggggccaagacctggggcctgagagccgtcgagtggccctcaagatgtttcag
tattacggctacaacgggtacctcagcgaccgcctctccatggacagagccatcccagac
tacaggccggacgggtgcaaaaacatgtcttacccgtccaacctgccacaagtcagtata
gtctttatctttgtgaacgaggcgctgtcggtcattctgcgctccatccattcagtcatg
aacagaacacccagccacctgctcaaagagatcatactggtcgacgacaacagcaataac
gatgagctaaaggagaagctgcaggactttgtaaaggagaccaacgctaagcagccgggt
ttcattaaggtggtccgtcacagtaggcaggagggtctgattcgctctcgagtgagtggc
tggagagccgcctctgcccctgtagtggctctttttgatgcccacgtggagttcaacatt
ggctgggctgagcctattctccaaaggatcaaagaagacagaaccagaattatatctcca
tcttttgacaacatcaaatacgacacatttgagattgaggagtatcccctctccgctcag
ggctttgactgggagctgtggtgccgctatctgaatccacccaaatcatggtggaaccta
aacaacagcactgctccaatcaggagtccggctctgatcggctgttttgtggtggaccgg
ctgtatttcgcagagatcggtctgctggatgaaggcatggagatttacggaggagagaac
gtggagctgggcgtcagggtgtggcagtgtggaggaagtgtggaggtgttgccctgtgcc
cgcatcgcccatatcgagcgcgcccacaaaccctacacagaggatctcactgcccacgtg
cgcagaaacgctctgagggttgcagaagtgtggatggacgagtttaaaagccatgtctac
atggcctggaacattccacaagaggactcagggatagacatcggtgacatcgccgaaaga
aaagcactgaggaaaaagctgcagtgcaagaccttccgctggtatctagtgaacatttac
cccgagatgagaatgtacacggacaccgtcgcatacggagtgctcagaaactctttgaag
actgacctgtgtctcgaccaagggccagacaccgacaacattcccatcctttacctctgt
cacgggatgacacctcagaatgtatactacaccagcactcagcagttatttgtgggcatc
ctgagccccaccgttgacgacgatgacaacaagtgcctggtggacgtgaacggccggccg
cggctcattgagtgcagctacgctgtggccaaacgcatgaagctccactggcgttttact
cagggaggctccatccagaatacaaagtcaaagcgatgccttgaactcgtggagaacaat
gacaatgagttcggatttcagctcaccctccaaaaatgcactggccagaactggaccatc
accaatatgttgcctggtagcaccttatga

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