Danio rerio (zebrafish): 114425
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Entry
114425 CDS
T01004
Symbol
zeb1b
Name
(RefSeq) zinc finger E-box-binding homeobox 1b
KO
K09299
zinc finger homeobox protein 1
Organism
dre
Danio rerio (zebrafish)
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dre03000
]
114425 (zeb1b)
Transcription factors [BR:
dre03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
114425 (zeb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
Homeodomain
zf-met
DUF6801
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
114425
NCBI-ProteinID:
NP_571784
ZFIN:
ZDB-GENE-010621-1
Ensembl:
ENSDARG00000013207
UniProt:
Q9DEH7
LinkDB
All DBs
Position
12:complement(26750268..26851726)
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AA seq
1078 aa
AA seq
DB search
MADGPRCKRRKQANPRRTNVSNYSHVLEGQSDSDDEDKLHIVEEEGSLLDGADCDSVAPD
DDPNGTADPDGRWDDVKEECVSDEDERSRDALVEEMLQQGDTAVIFPEAPDDEPRQGTPE
TSGHDENGTPDSFSQLLTCPYCSRGYKRYTSLKEHIKYRHEKSEDNFSCSLCSYTFAYRT
QLDRHMTAHKAGREQRHVTQSGGGGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECS
NCKKRFSHSGSYSSHISSKKCIGLISVNGRPRPSPATGAAKTPQCSSPYLPTSSPTARVQ
VRDKLDNSKPLQEQLPLTQIKSEPLDYEYKPVVVAPSARGVNGMFQGGAAAPLQGAVQAV
VLPTVGLVSPISINLGDLQNVLKVAVDGNVIRQVLESTQAKGQQAGTGIVGAGGIAQATQ
QVIQAISLPILDQDGNAKIFINYSLDPSQAQAVLQSPKKEPLGSNTEVCKGQKLPEDLTV
KTNRDKTTLTVDEKSMLHNDILLKHCGKDEHRINGKNLEEKMDLEGLCPGQPPLKNLLSL
LKAYFALNNEPTKEELAKISESVSLPAEVVKKWFEKMQLGQISMDPSSPQHEEEQTTPVD
LDGTKGASPKPDLDEQMNSEKQEERECCSPAEGIAASVNGIESVPASPSPLNLSADGPVP
ARTLEEGEGPLDLSLPKSATTASVASGHANTVYSAQEEPLNLTCTKKELLSNASTNAAIY
ASQPSANPINIMTTQLPTLVAITDQGQAQCLRALTTTKQTILIPQLTYSYTTTSSSPAGT
DTPQKNILHVNGIKEEKQEMGSEATSILEEQTDSDSGPTKKKMKRTESGLYACDLCDKIF
QKSSSLLRHKYEHTGKRPHECGICSKAFKHKHHLIEHLRLHSGEKPYQCDKCGKRFSHSG
SYSQHMNHRYSYCKKEAQGQGLGQGVEEEDNPGEEQPQTGSTATSPPSHLDSDERGSSTR
DDESEEEDEMGSGSLVDEDEIQVVKIGEEGDEDDQGADEDQERMEEDGDEEGEGETLKVV
VMQDECEEDENEEDEQTSEDAMDTSDHTEEMTERKTPGDNKNIGEHEGNTAAMNGDVK
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgaggaggacaaacgtg
agtaactacagtcatgtgctggagggccagtcagactccgatgatgaagataagcttcac
attgtggaggaggaagggagtctcctggacggggctgactgtgacagcgtggcccctgac
gatgaccccaacgggaccgctgaccctgacggcagatgggacgatgtgaaagaggagtgc
gtgtcggatgaagatgagaggagcagagatgctttggttgaggagatgctccagcaagga
gacaccgcagtcatctttccagaggctccagatgacgaaccgcgacagggcacaccagaa
accagcggacatgatgaaaatggcacgccagactcattttctcagctcctcacctgtccg
tactgctctcgtggctacaaacgttacacctcactgaaggagcacattaaatacagacac
gagaagagcgaggacaacttcagctgctctctctgcagctacacctttgcctacagaaca
cagctggacagacacatgaccgcacacaaagctggccgagaacagcggcatgttactcag
tcaggtggaggagggaatcgaaagtttaaatgcactgaatgtggcaaagccttcaagtac
aaacaccacctgaaagaacacctgcgcatccacagtggagaaaagccttatgaatgctcc
aactgcaagaagcgtttctctcattccggttcctacagttcccacataagcagtaagaag
tgcattggtctcatctcagtaaatggacgaccacgaccttctcctgctacaggggctgcc
aagaccccacagtgctcttccccgtacctgccaacctcctcccctacagcacgagtccaa
gtaagagacaaactggataacagcaaaccccttcaagagcagcttcccttgacacagatc
aagtctgagcctctggactatgagtacaagcctgtggtagtggccccatctgctagaggc
gtaaatggcatgtttcagggtggggcagcagcccctctccagggtgccgtacaggctgtt
gtgcttccaactgtgggactggtgtccccaatcagcatcaatctgggggacttacaaaac
gtgctaaaggtggcagtggatgggaatgtcattaggcaagtgctggaaagcacacaagct
aaggggcaacaagcagggacggggattgtaggagcaggagggattgcccaagctacccag
caagttatccaagccattagtcttcctatcttggatcaggatggcaatgctaaaatcttc
atcaactatagtctggacccatcccaagcccaagcagtccttcaaagtccaaaaaaggaa
ccattggggtcgaacactgaggtctgcaagggtcagaagctgcctgaggaccttacagta
aagacaaatagggacaaaaccaccctcactgtggatgagaagagcatgttacacaatgac
atattacttaagcactgtggtaaagatgaacataggattaacgggaaaaatcttgaggag
aagatggacttggaaggactgtgtcctggtcagcctcctctgaagaaccttctctccttg
ctcaaggcttactttgccttaaacaatgagcccactaaggaggagctggcaaagatatcg
gagtctgtcagtcttccagcagaggtggtgaaaaagtggtttgagaagatgcagctggga
cagatctccatggacccttcttcacctcagcatgaggaggagcaaaccactcctgtggat
ttggatggtactaaaggtgcatcacccaaaccagacttggatgagcaaatgaactcagag
aagcaagaggagagggagtgctgtagcccagcggagggcattgcagccagtgtgaatgga
atcgagagtgtccctgcatccccttcaccactaaacctatcggctgatggtcctgtccca
gccaggactcttgaggaaggcgagggacctctcgatctgtcgctaccaaaatccgctact
acagcctctgtggctagcggtcatgctaacactgtttactcggctcaagaggagccgctg
aatttgacttgcacaaagaaggaactgctcagtaatgcaagcaccaatgctgccatatat
gccagccaaccaagtgccaatcccataaacatcatgaccactcaactgcccaccctagtg
gctatcactgaccagggacaggcgcaatgtctacgtgcacttaccaccactaaacagacc
atcctgatcccgcagctgacttacagttacaccactacatcctccagcccggcagggacc
gacacaccacagaagaacattttacatgtcaatggcatcaaggaggaaaaacaggagatg
gggtcagaggccacctctatattggaagaacagacagactcagactcagggccgaccaag
aagaagatgaaaaggacggagagtgggctgtatgcctgtgacctgtgtgacaaaatcttc
cagaagagcagctcgttgctccgccataaatatgaacacacaggaaagaggcctcatgaa
tgcgggatctgcagcaaggccttcaaacacaagcaccacctaatagagcacctgcgcttg
cactctggagaaaagccctatcagtgtgacaagtgcgggaaacgcttctcccactctggt
tcctactcacaacacatgaatcatagatattcctactgtaagaaagaggctcaaggccaa
gggctaggccaaggagtggaagaagaggacaatcctggtgaggagcagcctcagacgggc
agtacagcgacctcgcctccatcccacctggactcagatgagcgggggagcagtacaagg
gacgatgaaagcgaggaggaggacgagatgggctcagggagcttagttgacgaggatgaa
attcaggtagtcaagattggagaggagggagatgaagacgatcagggagcagatgaagac
caggagaggatggaggaagatggtgatgaggaaggtgagggtgagacgctgaaagtcgtg
gtgatgcaagatgaatgtgaagaggatgaaaacgaagaggatgagcaaacgtcggaggat
gccatggacaccagtgaccacacggaggaaatgacagaaagaaagaccccaggggacaat
aagaacattggtgaacatgaaggaaacacagccgctatgaatggagatgtgaaatga
DBGET
integrated database retrieval system