Danio rerio (zebrafish): 321245
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Entry
321245 CDS
T01004
Symbol
smyd1a
Name
(RefSeq) histone-lysine N-methyltransferase SMYD1a
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre00310
Lysine degradation
dre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
321245 (smyd1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dre03036
]
321245 (smyd1a)
Enzymes [BR:
dre01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
321245 (smyd1a)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
321245 (smyd1a)
Chromosome and associated proteins [BR:
dre03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
321245 (smyd1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
TPR_12
Motif
Other DBs
NCBI-GeneID:
321245
NCBI-ProteinID:
NP_991103
ZFIN:
ZDB-GENE-030131-9825
Ensembl:
ENSDARG00000009280
UniProt:
A0A8M1PGA4
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All DBs
Position
5:complement(72111189..72125515)
Genome browser
AA seq
485 aa
AA seq
DB search
MTVEKTDPVEVFGAGLKGRGLRGTRDLSAGEVVFAEASFAAVVLDSLSLQVCHSCFRRQV
NPHRCAQCKFAHYCDRTCQRAAWDEHRKECSAIRNIGKAPNENVRLVARILWRIQKHTGL
VSDSQLTTLDMLEDHLSRMTPEDLKELKVDVKTFYTYWPKKSKAVGEDYVSHLFGVISCN
GFTLSDQRGLQSVGIGLFPNLCLVNHDCWPNCTVILNHGDQSALDASFHSSRRIELRALE
PISAGQELTVSYVDFLSVSTDRQRLLQQQYYFDCKCEHCVNGTKDELMTAVKPTEDGKQP
SAEVVKQLTDFSLQALVKIEAARAQGNFHEVIRICRECLEKQDPVFADTNVHVLRVLSTA
SEVLSFLQQFQEAAGYAQRMVDGYMKLYHPNNAQLGMAIMRAGVTHWHAGLIEAAHGLIC
RAYGILMITHGPHHPISKDLEAMRRQTEMELRMFKQNEHVYHSMREAALTSKPMSVAGEQ
VQIKA
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtggagaagacggaccccgtggaggtgttcggagccgggctgaagggccggggt
ctgcggggtaccagagacctgtcggctggagaggtggtgttcgctgaggccagtttcgcc
gctgttgtgttggacagtctctctctacaggtgtgtcacagctgtttccgccggcaggta
aaccctcaccgctgcgctcagtgtaagtttgcgcattactgcgaccgcacgtgtcaacgc
gccgcctgggacgaacacaggaaggaatgttccgccatcagaaacatcggaaaggctccc
aacgagaatgtgcgtctggttgctcgtatcctgtggcgcattcagaaacacaccggcctg
gtctcggactctcagctcaccaccctagatatgctggaggatcatctctccagaatgacc
cccgaggacctgaaggagctcaaagtggatgtgaaaaccttctacacctactggcctaag
aaaagcaaagcagtgggagaggattatgtgtcgcatctcttcggtgtgatcagctgtaac
ggcttcactctgagtgaccagcggggtctgcaatcggtcggcatcggcctgtttccaaac
ctctgtctggtcaatcacgactgctggccgaactgcaccgtcatcctcaatcacggagat
cagtcagctctggatgcttcattccactccagcagaaggattgagctgcgggctctggag
ccgatctctgctggacaggagctgaccgtcagttatgtggactttctgagcgtctccaca
gaccgccagcggctcctccaacagcagtattacttcgactgcaagtgtgaacactgtgtg
aacggcaccaaagatgagctgatgaccgccgtcaaacccaccgaggatggaaaacagccg
tctgctgaagtggtcaagcagctcactgacttcagtcttcaggctctggtgaagattgaa
gcggctcgagctcaaggaaacttccatgaggtgatcaggatctgccgtgagtgtctggag
aagcaggatccggtgtttgccgacactaacgttcatgttctgcgtgtcctgagcaccgcc
agcgaggttctgtccttcctgcagcagttccaggaggcggccggatacgctcagcgcatg
gtggatggatacatgaagctttatcaccccaataacgctcagctgggcatggccatcatg
agagcgggcgtcacacactggcatgctggactgatagaggcagctcatgggctgatctgc
agagcgtacggcatcctgatgatcacacacggcccacatcaccctatcagcaaagacctg
gaggcgatgcggaggcagacagagatggagctgcgcatgttcaagcagaacgaacatgtt
tatcacagcatgcgtgaagccgccctcaccagcaaacccatgagcgtcgctggagaacaa
gtgcagatcaaagcatga
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