Danio rerio (zebrafish): 335226
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Entry
335226 CDS
T01004
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04120
Ubiquitin mediated proteolysis
dre04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
335226 (syvn1)
04120 Ubiquitin mediated proteolysis
335226 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dre04121
]
335226 (syvn1)
Enzymes [BR:
dre01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
335226 (syvn1)
Ubiquitin system [BR:
dre04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
335226 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
FANCL_C
zf-Nse
Motif
Other DBs
NCBI-GeneID:
335226
NCBI-ProteinID:
NP_997900
ZFIN:
ZDB-GENE-030131-7166
Ensembl:
ENSDARG00000017842
UniProt:
A5PMC1
LinkDB
All DBs
Position
14:complement(26452692..26465795)
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AA seq
618 aa
AA seq
DB search
MVRAALVTATSLALTGAVVAHAYFLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKL
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWVFHFRVLSLMVLLGVMDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYTLHTIDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQATDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASQPNQTPAPPAAQAPAPPAPANAP
IPPPVNVAPGMMPQFPPGLFPFWGPFPGAPPPAVPGAPAAPTDTPQPSSEGAQGAESGAG
GLAQSTADAASAAPGAMPGFPFTMPPPFPSAPWLPMPPPPPFMSSMPPPPSSLSSMSEAE
LRELEQEGRRGLEARLQCLHNIHTLLDAAMLNIHHYLSTVATLSPPRSETNTGETSESAN
VESSPSTANTETAGQEIQSQSGESINGAAGFSQPDSTTEGERDVKEEDEDDGEPSAAELR
RRRLRKLETTNTPDHGNL
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagccgctcttgtaacagccaccagtttggcgctgactggcgccgtggttgcc
catgcctacttcctcaagcaccagttctacccgactgtggtatacctcaccaaaagcagc
cctagtatggcagttttatatattcaggcttttgttttggttttccttcttgggaaatta
atgaggaaggtcttttttgggcaactgagagctgctgaaatggagcacctgattgagcgc
tcctggtatgcagtgacggagacctgtttagcctttaccgtcttcagggatgatttttcc
cctcgctttgtggccctttttaccttgctgcttttcctcaagtgcttccattggctggct
gaagacagggtggactttatggagaggagtccgaacatctcatgggtcttccattttaga
gtgctctctctaatggtgttgctgggagtgatggactttctgtttgtcaatcatgcgtgt
cacagcattataacaagaggagcgtcagtgcagctagtttttggatttgagtatgcgatc
ctgatgactatggtcctcacaaccttcatcaagtacactttacatacaattgatctgcag
agtgaaaatccatgggacaataaggctgtgtacatgctctacacagagctctttacaggt
ttcatcaaggtgcttttgtatatggcattcatgaccatcatgataaaagtgcacaccttc
cctttgtttgctattcgacccatgtatcttgcaatgaggcaattcaagaaggcagtaaca
gacgccatcatgtctcgacgagccatacgtaatatgaatactctctatccagatgccacc
cctgaagacttgcaagccaccgacaatgtgtgcatcatctgcagagaagagatggtgacc
ggagccaagaaactgccgtgcaaccacatctttcactcgagttgccttcgctcatggttc
cagagacagcagacgtgtccgacctgtcgtatggacgtcctgcgagcatctcagccaaac
cagacgcctgcccctcctgcagcacaagcacctgcccctcctgctcctgccaatgcccct
atacctccacctgtcaatgttgctccagggatgatgcctcagtttcctcctggtctgttc
cccttttggggtccttttcctggtgcgcctccacctgctgttcccggagcaccggcagct
cctactgacactccacagcccagcagtgaaggagcgcagggagcagaatcaggagctggc
ggtttagcccagtcgactgcagatgctgcctctgctgctccaggagccatgcctggattc
cccttcaccatgccaccacctttcccatcagctccatggctgccgatgcctcctccacca
ccctttatgtcctcgatgccgccgccaccatccagtctgtccagcatgtctgaggctgag
ctgagagagctggagcaggagggccggcggggtctggaagccagactgcagtgtcttcac
aacatccacactttgctagatgccgccatgctcaacattcaccactacctcagcaccgtg
gctactttaagtcctccaagatcagaaacaaacactggcgagacaagtgaatctgcgaat
gtggagtcgtctccgtccactgccaacacggaaacagccggtcaggagatccagtctcag
agcggagaatctataaatggagcagcaggcttttctcagccagactcaaccacagaagga
gagagagatgtcaaggaggaagatgaggatgacggtgagccgagcgccgctgagttgaga
cgccgccgtctccgtaagctggagaccacaaacactcctgatcacggcaacctttaa
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