KEGG   Danio rerio (zebrafish): 559736Help
Entry
559736            CDS       T01004                                 

Gene name
galnt12
Definition
(RefSeq) polypeptide N-acetylgalactosaminyltransferase 12
  KO
K00710  polypeptide N-acetylgalactosaminyltransferase [EC:2.4.1.41]
Organism
dre  Danio rerio (zebrafish)
Pathway
dre00512  Mucin type O-glycan biosynthesis
dre00514  Other types of O-glycan biosynthesis
dre01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:dre00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00512 Mucin type O-glycan biosynthesis
    559736 (galnt12)
   00514 Other types of O-glycan biosynthesis
    559736 (galnt12)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:dre01003]
    559736 (galnt12)
Enzymes [BR:dre01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.41  polypeptide N-acetylgalactosaminyltransferase
     559736 (galnt12)
Glycosyltransferases [BR:dre01003]
 O-Glycan biosynthesis
  Mucin-type
   559736 (galnt12)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Glycos_transf_2 Ricin_B_lectin Glyco_tranf_2_3 Glyco_tranf_2_2 Glyco_transf_7C
Motif
Other DBs
NCBI-GeneID: 559736
NCBI-ProteinID: XP_688194
ZFIN: ZDB-GENE-060503-704
Ensembl: ENSDARG00000055490
Vega: OTTDARG00000015623
LinkDB All DBs
Position
19
AA seq 578 aa AA seqDB search
MAICGRRSRSKFILYIVGAFVVGYLVFHRNTQSDVGLAKIREVPDEHKNVDEQFLKRPVY
EKPALDVNALGEMGRAVKLDLSGEEKREEEESIKKHQINTYVSDRISLHRRLAERWNPLC
RNLKYDYLSLPTTSVVIAFYNEAWSTLLRTVHSVLETSPDLLLNEVILVDDYSDREHLKE
PLENYIADLKKVRLIRARKREGLVRARLLGASIATGEVLTFLDCHCECHEGWLEPLLQRI
KEEPSAVVCPVIDVIDWNTFQYLGNPGEPQIGGFDWRLVFTWHSIPEHEQKRRSAATDVV
RSPTMAGGLFAVNKKYFLYLGTYDTGMEVWGGENLEFSFRIWQCGGSLEIHPCSHVGHVF
PKKAPYSRNKALANSVRAAEVWMDDFKEVYYHRSPHARLEAYGDVTDRRKLRMRLRCKDF
RWFLDNIYPDIQVPEDKPGMFGMLKNKGMTNYCFDYNPPDEHKIAGHRVILYPCHGMGQN
QFFEYSTLQEIRYNTRDPAGCVVADPVSTFLTMNLCSKPREAVPEDQKFLFREDGSLYHV
QTQKCVEAVDRTDAGSPGPALRPCSDSDAQKWFFEERT
NT seq 1737 nt NT seq  +upstreamnt  +downstreamnt
atggcaatatgtggcagacggagtcgctccaagtttatcctgtacattgtcggtgctttt
gtagtgggctatttagtatttcacaggaacacgcagagtgatgtgggactggcgaaaata
agagaagtgccagacgagcacaaaaatgtggacgagcagtttctgaagagacctgtttac
gagaagcctgctttagatgtaaacgcgctgggagagatgggcagagctgttaaactggac
ctgagtggggaagagaagcgagaggaagaggagagcatcaaaaaacatcaaataaacact
tatgtgagcgataggatatctttacaccgcagactggctgaaagatggaaccctctttgt
agaaatctgaaatatgactacctgagcctgcctactacatcagtagtgatcgcattctac
aatgaagcctggtccacactattgaggaccgtgcacagtgtactggagacctcacctgac
ctgctgctgaatgaagtcattctggtggatgactacagtgaccgagaacacttaaaggag
cctctagagaattacatcgccgatctgaaaaaggttcgtctgatccgagcaaggaagaga
gaaggtctggtgcgagcgcggcttttgggggcttccatcgccacaggggaagtgctgacc
ttcctcgattgccactgcgagtgccatgaaggctggctggagcctttactccagagaata
aaggaggagccttcagctgtggtgtgtccagtcattgacgtcattgactggaacaccttc
cagtacctgggcaacccaggagaacctcagatcggaggatttgactggcgattggtgttc
acgtggcactctatcccagaacatgagcagaaacgcagaagtgccgccactgatgttgtc
aggtctccaacaatggctgggggtttgtttgccgtcaacaagaagtacttcctttacctg
ggcacatatgacacaggaatggaagtctggggtggagagaacctggagttttcatttaga
atctggcagtgtggaggaagcctggaaatccatccttgctctcacgtgggtcacgtcttt
ccgaagaaagctccatactcaagaaacaaggccttggccaacagtgtgcgagcagcagaa
gtctggatggatgatttcaaagaggtgtattaccaccgcagccctcatgcacgtctggaa
gcgtatggggatgtgacggatagacggaaactcagaatgcgtcttcgctgcaaagatttt
agatggttcttggataacatctaccctgatattcaagtccccgaagacaagcctggaatg
tttggcatgttgaagaacaaaggaatgaccaactactgcttcgactacaacccgcctgat
gaacataagatagccggtcaccgggtaatcctttacccatgtcatggcatgggacaaaac
cagttcttcgagtactccacactccaggaaatccgctacaacacgagggatcctgcaggc
tgtgtcgtagctgatcccgtctccacattcctcaccatgaatctttgtagtaaacccaga
gaagctgtgcccgaagaccagaagtttcttttcagagaggatggctctttatatcacgtt
cagacgcagaagtgtgttgaagcagtggatcggactgatgctgggagtcctggacctgct
cttcggccttgctcagactctgatgctcagaagtggttctttgaagagagaacatag

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