Danio rerio (zebrafish): 560951
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Entry
560951 CDS
T01004
Symbol
xylt1
Name
(RefSeq) xylosyltransferase 1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
dre00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
dre01100
Metabolic pathways
Module
dre_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
560951 (xylt1)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
560951 (xylt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
dre01003
]
560951 (xylt1)
Enzymes [BR:
dre01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
560951 (xylt1)
Glycosyltransferases [BR:
dre01003
]
O-Glycan biosynthesis
Glycosaminoglycan
560951 (xylt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
FXMR_C2
Motif
Other DBs
NCBI-GeneID:
560951
NCBI-ProteinID:
NP_001165868
ZFIN:
ZDB-GENE-111017-2
Ensembl:
ENSDARG00000061248
UniProt:
D3J0E7
LinkDB
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Position
3:complement(26418451..26524826)
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AA seq
919 aa
AA seq
DB search
MFGSLCARKLARRSRSALIAALTVLLVQTLIVWNFSSLDTGEDRKDNGREKRDRIGINKA
YSEYPKSGFQKRQHQPPLGKASNRHKQQPDGYYSHRPKEKVRVDSNNENSVPKDFENIDN
SNFGARSQTQRHAPGKHKQGLLEKAHAQQSQSKNSNEVIQYAQNKAGLNQTHTDLHQRAN
PTLRPQQSQQHRHHFQRPKRSITPTADIKYDQPPKCEISGKEAISALSRAKTKECRQQIV
EVYCRHKEHQLMPEKVTRYCPVEGKVNMNVQWEEDSMETVPAVPVRIAFMLVVHGRATRQ
VQRLFKAIYHTSHFYYIHVDQRSNYLHRQMVALAHQYPNVRVTSWRMSTIWGGASLLTMY
LQSMKDLLAMRDWSWDFFINLSAADYPIRTNDQLVAFLSKYRNMNFIKSHGRDNARFIRK
QGLDRLFFECDTHMWRLGDRKIPEGISVDGGSDWFLLNRMFVEYVINTQDDLVTNMKRFY
AYTLLPAESFFHTVLENSPHCESMVDNNLRITNWNRKLGCKCQYKHIVDWCGCSPNDFKP
SDLPRFQQTTRPTFFARKFEASVNQEIVNQLDVFLFGSLPQGTPGLKAYWENVFDEADGI
HSLSDAHLTHYHAFARLGLARTANSLQGDPNDNSCRYFAMGHPVSVHIYFLSDEFQGYLV
RHHATNLATSKLETLETWVMPKQFYKFTNPPKTFTRLQFAEIGTDWDAKERIFRNFGNMM
GPMDEPVGMQKWGKGSNVTVTVVWIDPTNVIAATYDILIDASAEFTHYRPPLNLPLRPGM
WTVRVLHHWSPVAETRFLITPLTHHKHLPIRHEDALKMHNGPAKNSYMEQSFHGLNPILN
IPVHLGQVEAAEHNAGLTGSELERWVDSLVGDVWSAVDVCSTGPSGCPVMQTCRETVWSS
LSPDPKSQLGPPKNNGRIR
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgttcggcagtctgtgcgcccgtaagctggctcgccgatcgcggtctgcgttaatagcc
gcgctgacagtgctgctggtccaaacgctcatcgtgtggaacttcagcagtctggacacg
ggagaagaccgaaaagacaacggaagggagaagagggaccgaatcggcatcaacaaagcc
tacagcgagtacccgaagagcggcttccagaagaggcaacaccagccgccgctgggaaaa
gcgtccaatcgacataaacagcagccggatggctactattcgcaccggcccaaggagaaa
gtccgtgtggacagcaacaatgaaaactctgttcccaaagactttgagaatatagacaac
agtaacttcggcgcacgttcccaaacacagagacacgcacctggcaagcacaaacaaggc
cttctggaaaaggcgcatgcacagcaaagccagagcaagaactccaatgaggtcattcag
tatgcacagaacaaagctggcctcaatcagacgcacactgatcttcaccagagagccaat
cccaccctccgcccacagcaatcccagcaacaccggcaccacttccagcgacccaagcga
tcgatcacacccactgctgacatcaagtatgaccaaccacccaaatgtgagatcagtgga
aaagaggcgatctctgccttgtcccgtgctaaaaccaaggagtgccggcagcagatagta
gaggtttactgccgccacaaagaacaccagctcatgcccgagaaggtcacccgctactgt
cctgtagagggcaaagtaaacatgaatgtgcaatgggaggaggactcaatggagactgtg
cctgcagtaccagtgcggatcgccttcatgttggtggtccacggacgtgccacacgccag
gtgcagcgactcttcaaggccatataccacacgtctcacttctactacattcatgtggac
cagcgatccaactacctgcacaggcagatggtggctctcgctcaccagtatcctaacgtc
cgggtcacatcgtggcgcatgtctacaatatggggtggtgccagcctgctcaccatgtac
ctgcagagcatgaaggacctgctggccatgagggattggtcctgggatttcttcatcaac
ttgagtgcggctgattaccctatccggaccaatgatcagctggtggccttcctgtccaaa
tacagaaatatgaatttcatcaagtctcatgggagagacaacgctcgattcatcagaaaa
cagggtttggaccggcttttctttgaatgcgacacccatatgtggcggcttggagacagg
aaaattccagaaggaatatcggtggatggaggctctgactggtttctgcttaaccggatg
tttgtggagtacgtcattaacactcaagacgaccttgtgactaacatgaagcgcttctat
gcgtacacgctgctgccagcagagtcgttcttccacacggttctggagaacagtccgcac
tgcgagagcatggtggacaacaacctgcgcatcaccaactggaatcgaaagctgggttgc
aagtgtcaatacaagcacatcgtggattggtgcggctgctcgcccaacgacttcaagcct
tccgatctgccccgtttccagcaaaccaccaggcccacattcttcgcgaggaagtttgaa
gccagtgtaaatcaagagatagtgaaccagttggacgtcttcctgttcgggagtttgccc
cagggcacgccgggtctcaaggcctactgggagaatgtttttgatgaagcggatgggatt
cacagcttgtccgacgcacatctcactcactatcatgccttcgcccgattgggtctggca
cgaactgccaactcgctacagggtgaccccaatgacaacagctgcaggtattttgccatg
ggccatccggtgtctgtccacatctacttcctgtccgatgagtttcaggggtacctggtc
aggcatcacgccaccaatctggcaaccagcaaactggaaaccctggagacctgggtaatg
cccaaacagttctacaagttcaccaatcctcccaaaaccttcacccgactgcagtttgct
gagattggaacagactgggacgcgaaggaaaggatattccggaattttggaaatatgatg
ggccccatggacgagcctgtgggaatgcagaaatgggggaaaggctcaaatgtgaccgtg
actgtggtgtggattgaccccactaatgtgatcgctgcaacatatgacatcctgatcgat
gccagtgccgaattcacacactacaggcctccgctgaacctgcccctgcggcccggcatg
tggaccgtccgtgtgctgcaccactggagccccgtggcggagactcgcttcctcatcact
ccactcacacaccacaaacacctgcctatacgccatgaggatgctttaaaaatgcacaac
ggaccggctaagaacagctacatggagcagagtttccatggcctgaaccccatcctcaac
atcccagtgcacctgggtcaggtagaggcagcggagcacaacgcaggtctcacggggtct
gagctggagcgctgggtggacagtctggtgggcgacgtgtggtcagcagtggacgtgtgc
tcgacgggccctagtggatgccccgtcatgcagacttgcagggaaactgtgtggagctct
ctcagcccagacccaaaatcccagctcggcccacccaaaaacaacggacgaatcaggtag
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