KEGG   Danio rerio (zebrafish): 572348
Entry
572348            CDS       T01004                                 
Symbol
itga10
Name
(RefSeq) integrin alpha-10
  KO
K06586  integrin alpha 10
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04510  Focal adhesion
dre04512  ECM-receptor interaction
dre04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:dre00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    572348 (itga10)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    572348 (itga10)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    572348 (itga10)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:dre04515]
    572348 (itga10)
Cell adhesion molecules [BR:dre04515]
 Integrins
  Integrin alpha subunits
   572348 (itga10)
SSDB
Motif
Pfam: VWA FG-GAP Integrin_A_Ig_2 Integrin_A_Ig_1 Integrin_A_Ig_3 VWA_2 FG-GAP_3 FG-GAP_2 ITGAX-like_Ig_3
Other DBs
NCBI-GeneID: 572348
NCBI-ProteinID: XP_003200204
ZFIN: ZDB-GENE-100922-54
Ensembl: ENSDARG00000002507
UniProt: A0A8M1RMK2
LinkDB
Position
16:complement(14280493..14353827)
AA seq 1170 aa
MEIHKYLLLFKITILLKGLCECFNIDVKRPRIFSGPEDALFGFSVLQHDDNGEKLLLVGA
PWDGPQNNRKGDIYKCIVEDENSNCSKVNLGENAFQNVSRNLKNSHLGMTLTPTDSDGFL
ACAPLWSQECGTSLFSTGICASVTSDMEPNDVIAPTAQRCTTYMDIVIVLDGSNSIYPWY
EVQNFLSNILSKFHISPEQMQVGVLQYGEISVHEWSLRDYQTTADVVEAAKNISRQEGRE
TRTAYAIQMACTEAFSPDRGAREGATKVMIVVTDGESHDGEDLPEALIECEKRNITRYAI
AVLGHYIRRQQDPETFINEIKYISSDPDEKYFFNVTDEAALNDIVDALGDRIFSLEGTLG
YNESAFLMEMSQIGFSTHILDDGILFGMVGAYDWEGGILKESKEGQLMPPREAFEKEFPL
ELKNHAAYLGYTVSSVVVGNWRRLYVAGAPRFKHKGKVILFDLTPEGDVIITQALNGEQI
GSYFGSEVCVVDVDQDGITDILLIAAPMFLGAGNKETGKVYVFCLDGDGFAPNGTLHSQQ
KAQDARFGYAMAVAPDLNHDGYTDLLVGAPLEDDHQGALYIYHGDEYYIIPQYKQRISGS
SLSTGLRYFGRSLSALLDLDGDELLDLAVGAQGSAVLLKSRSIVQINVSLSFQPHSINVI
QKNCLRAGRDSACLNATVCFLALSRSPGSRGTYFDMQVGAMLDDRKISARALFDSNSQRQ
TLMSISVRVGETKCYILPFHVFDTADYIRPISFTLRFKINDTESGPVLDEGWPTTHKKSI
PFFKDCGEDDVCVTDLVLQAHMDISGTRQVPYVIRSPRRRLAVEVQLQNKLENAYNTSLT
LHYSKNLHFSTLSIREDAQFKIECTALGSNSHSCNVSYPVFRSQSKVNFMLEFEFSCTSL
ISKVQMRLIASSDSVEREGTLSDNTVQLQSIVQYEPDLFITSDSNLNRYEVHPTRTASEG
TGPEFYTHFRVQNLGCYAVSNLELSVSLPAVASGDRVFAAVVDAFSHNASGVNCTIVNDI
SKLKSSQRDVRPLHPEDMKKTELMNCSSSWCVEVMCHIQQLLKGQTALIRITRRIHDSFF
RQAKFKAVTIVGSYQLSARESNLITMGNAALLRETTLEVLKGRSIPISLWILIGSIIGGL
LLLALLVFILWKLGFFTRKQRKDEDENDDN
NT seq 3513 nt   +upstreamnt  +downstreamnt
atggagattcacaagtacctgctgctattcaagatcaccattctacttaaagggctgtgt
gaatgttttaatattgatgtaaagagaccaaggatcttcagtggaccagaagatgctttg
tttggtttctctgtgttgcagcatgatgacaatggagaaaaattactcctagttggtgct
ccatgggatggaccacaaaataataggaagggagatatttacaagtgcattgtggaagat
gagaattccaattgctccaaagttaatctaggtgaaaatgcatttcagaatgtgtctcga
aatcttaaaaactctcatttggggatgaccctgacccctactgattcagacggcttcctg
gcatgcgctcctctgtggtcccaggaatgtggaacatctctgttcagcacaggaatctgt
gcatctgtcaccagtgacatggagcccaatgacgtcattgcaccaacggcacagagatgc
accacatacatggacatagtgattgttttagatggctctaatagcatctacccctggtat
gaggtgcagaacttcctcagcaacatactcagcaagttccacattagccctgagcaaatg
caggttggtgtcttgcagtatggggagatttcggtccatgagtggtctctcagggactat
cagacaacagcagatgtggttgaagccgccaagaacatcagccgccaggagggacgagag
acccggacagcctacgccatccaaatggcctgcacggaggccttcagtcctgacagagga
gcgagggaaggggccactaaagtgatgatagtggtgaccgatggagagtcccatgatggc
gaagaccttcccgaggccctgattgaatgtgagaagcgtaacatcaccagatatgccatc
gctgtattaggtcactacatccgcagacagcaggacccagagacgttcatcaatgagatt
aagtacatctccagtgaccccgatgagaaatacttcttcaatgtgacggatgaggctgct
ctaaatgacattgtagatgcgttgggagatcgcatatttagtctagaaggcactttagga
tacaatgaaagtgcctttcttatggagatgtctcagattgggttttcaacacacattttg
gatgatggcatcttgtttggcatggtgggagcctacgattgggagggaggcatcctgaaa
gaaagcaaagaagggcagcttatgcccccacgagaggcctttgagaaagagttcccactg
gagctcaagaatcatgcagcctacctaggttacacagtgtcctcagtggttgtggggaac
tggaggaggctgtacgttgctggtgcacccagattcaagcacaaaggaaaggtcatcctg
tttgacctcactcctgaaggggatgtcataatcacacaggccctgaatggagaacagatc
ggctcatattttggcagcgaggtatgcgtggtggacgtggatcaggatggaataacagat
atcctgcttatagctgctccaatgtttctgggagccggaaacaaagaaacaggcaaagtc
tacgtcttctgtctggatggggatggttttgctcccaacgggacgctgcattctcagcag
aaggcacaggatgcacgctttggttatgccatggctgtggcccctgacctcaaccatgat
ggatacactgatctgctcgtgggagctccgcttgaggatgaccaccagggagctctttac
atctaccatggcgatgaatactacatcatacctcagtataaacaacgtatctcaggctcc
tctctgtccacgggcctgcggtattttggccgtagcctgagcgctctgctggatctggat
ggggatgagttactggatcttgctgtgggagcacagggctctgctgtccttctgaagtca
cgcagtatcgtgcagatcaacgttagcctgtccttccagccacactctattaatgtgatt
cagaagaactgcctcagagctggacgagactccgcatgccttaatgccaccgtttgcttc
ctggccttgtctcgctctcctggctctcgtggcacatattttgatatgcaggtgggggcc
atgctggatgacagaaagatctcagctcgtgctttgtttgactccaactctcagcgtcag
accttaatgagcatcagtgttcgtgttggagagaccaagtgctacatcttgccatttcac
gtttttgatacagccgattacatccgaccgatcagcttcactttacgcttcaaaatcaat
gacacagaaagcggcccggtacttgacgagggctggccaacaacacacaagaagtctatc
ccattcttcaaagactgtggggaggatgatgtatgtgtaaccgatctagttttacaggcc
catatggacatttctggaacaaggcaggtgccgtacgttatacgaagtccacgacggcgg
cttgcggtggaagtgcagctacaaaacaagctagaaaatgcctataacacaagtctcact
cttcattactccaaaaacctgcacttcagcaccttgagtatacgggaagatgcccagttt
aagattgaatgcacggctctaggctcaaacagtcactcgtgtaatgtcagctatcctgtg
tttcgctctcagtcaaaggtgaacttcatgctggaatttgagttcagctgtacgtctctc
atcagtaaagtccagatgaggctcattgcttccagtgacagtgtggagagggaaggcaca
ctatcagacaacaccgttcagttgcagagtattgtacagtatgagcctgatctcttcatc
acaagtgactcaaacctaaaccgctatgaggttcacccgaccaggacagcatcagagggg
acgggtcccgagttctacacgcatttcagggtgcagaatctgggctgttatgctgtcagc
aatctggagctgagcgtcagtttgcctgcagtggcttcaggagaccgggttttcgcagct
gtggttgatgctttctctcataatgcttcaggtgtaaactgcactatagtcaatgatatt
tctaagctcaagtccagtcagagagatgtccgtccacttcatcctgaagatatgaagaaa
actgagctaatgaactgcagttcgtcatggtgtgtggaggtgatgtgtcacatccagcag
ctgctcaagggacagacagccttgattcgcatcactaggaggatacatgacagcttcttc
agacaggccaagttcaaagcagtgacaatcgtaggctcctaccagctttctgctcgagag
tccaatctgattacaatgggaaatgctgccctcttgagggagactactctggaggtgctg
aagggccgttcgatcccgatctccctgtggattctgattggcagcatcattggaggactg
ctgcttcttgcacttttagtattcatcctttggaagttgggatttttcacaaggaaacag
aggaaggacgaggatgaaaacgatgacaactga

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