Danio rerio (zebrafish): 798583
Help
Entry
798583 CDS
T01004
Symbol
kcnma1b
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
dre
Danio rerio (zebrafish)
Pathway
dre04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
798583 (kcnma1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dre04040
]
798583 (kcnma1b)
Ion channels [BR:
dre04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
798583 (kcnma1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
Motif
Other DBs
NCBI-GeneID:
798583
NCBI-ProteinID:
XP_021336127
ZFIN:
ZDB-GENE-101209-2
Ensembl:
ENSDARG00000110727
UniProt:
A0A8M9PXE8
LinkDB
All DBs
Position
12:complement(48898810..48943560)
Genome browser
AA seq
1107 aa
AA seq
DB search
MTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALVIYFIDSSDPIESCEHFDKNFTLQID
MAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWLGLRFLRALR
LIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWENFQNSQPLS
YWECVYLLMVTMSTVGYGDVCAKTTLGRLFMVFFILGGLAMFASYVPEIIELIGNRKKYG
GSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPNLELEALFKR
HFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIMRVISIKNYHPK
IRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIAQSCLAQGLSTMLANLFSM
RSYIKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTVCELCYVKLKLLLIAIEYKSD
QRESSTLINPGNHVKMQEGTLGFFIASDAKEVKRALFYCKACHDDITDPKRIKKCGCKRM
LYSKSNYNGYIKSIADESQCPRPAVRSSAVPAARVPVPLVNYRKGSTLSADHHKGLLLSP
AASYLHRLSLASSRELQRSREGVDDEGVRLHRACSLPVKHRHPSTHSLLVEEEQHSSLSP
KKKQRNGGMRTSPTCSPKNLIRHDPLLEMETMDENIKKYDSTGMFHWCPSKDIERVLLTR
SEAAMTVLSGHVVVCIFGDVKSALIGLRNLVMPLRASNFHYHELKPIVFVGSLEYLKREW
ETLHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDASLQDKECILASLNI
KSMQFDDSIGLLQANSQGFTPPGMDRSSPENSPVHGLVRQASITTGANIPIITELVNDSN
VQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGGATP
ELEGLLAEENALRGGYSTPQTLANRDRCRVAQLALYDGPFADLGDGGCYGDLFCKALKTY
NMLCFGIYRLRDAHLTAASLCTKRYVITNPPYEFDLVPTDLIFCLMQFDHNAGQSRSNLN
TQSSFCPVRRASRSRCTPRDKQKYVPL
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgacctctgtcaaagactgggctggagtcatgatctctgcacagacgctcaccggacgc
gtgctggtggtgttggtgtttgccctcagcatcggcgctctggtgatttacttcatcgac
tcctctgatcccattgaatcctgtgagcatttcgacaagaacttcaccctgcagatcgac
atggccttcaacgtcttcttcttgctgtattttggactgcgttttatagcagccaatgat
aagctgtggttctggctggaggtaaactcagtggtggatttcttcacggttccgccggtc
tttgtgtctgtttacctgaaccggagctggctgggactgaggttcttaagagccttgagg
ctgatccagttttcagaaatattgcagtttttaaatatcttaaaaacaagcaactccatc
aagttggtgaatttgtgctccatctttataagcacatggctgacggcggctggattcatt
catttggtggagaactctggagatccttgggagaacttccagaattcgcagcctctgtcg
tactgggagtgtgtgtatttactgatggtgaccatgtccacagtgggctatggagatgtg
tgtgcgaaaacaaccctcggccgcctcttcatggtcttcttcattctgggaggactggcc
atgtttgccagctacgttcctgaaatcatagagttaataggaaaccgcaagaaatatggt
ggttcctatagtgcagtaaatgggagaaagcatatcgtggtgtgtggacacatcacactg
gagagcgtctccaacttcctcaaagacttcctacacaaggacagggatgatgtcaatgta
gaaatagtttttctccataatatttcccctaatcttgagctggaagccttattcaagaga
catttcacccaggtggagttttaccagggctctgtgctcaatcctcacgatctcgctcga
gtcaagattgaatcagccgatgcctgtctgatcttggccaataaatactgcgcagatcct
gatgcagaggacgcatccaatatcatgagggtgatatccattaaaaactatcatccaaag
atacgcatcattacacagatgctgcagtaccacaataaggctcatctgctgaacatcccg
agctggaactggaaggaaggagacgatgccatctgcctggcggagctgaagttgggcttc
atcgcccagagctgcctggcacaggggctctccaccatgctggccaacctgttctcaatg
aggtcctatatcaagattgaggaggacacgtggcagaagtattatctagaaggagtagcc
aatgagatgtacactgagtatctgtccagtgccttcgtgggtttatctttccccaccgtc
tgtgaactctgctatgtgaagctgaagctgctgctgatcgccatcgagtataaatcagac
cagagagagagcagcactctgattaaccctggcaatcatgtgaagatgcaggagggaacg
ctgggctttttcatcgccagcgacgccaaagaggtcaagagggctcttttctactgtaaa
gcctgtcatgatgacattacagatcctaaacgcatcaagaagtgcggatgcaaacggatg
ttgtattctaaaagtaactataacggatacatcaaatcaatagcggatgagtctcagtgt
ccccgtcccgccgtcagatcctccgctgtaccggccgcccgcgtccccgtgccgttagtt
aattaccgtaaaggctcgactctgtctgcggatcaccataagggcctgcttctgtctccg
gccgcctcatacctgcacagactgagtctggccagctctcgagagcttcagcgcagccgt
gagggtgttgatgatgaaggtgtgcgtctgcaccgggcctgcagtctgcctgttaaacac
agacaccccagcacacactctctcttagtggaggaggagcagcactcttctctctccccc
aagaagaagcagcgtaatggaggaatgaggacatcccccacctgctcccccaaaaacctc
atcagacacgatccgctgctggagatggagaccatggatgagaacatcaagaagtatgat
tccacagggatgtttcactggtgtccatcgaaggacatcgagagggtcctcctgacgcgc
agtgaggcggcgatgacggtgttgagtggtcatgtggtggtctgtattttcggggatgtg
aagtctgctctgattggcctgaggaacctggtgatgccgctgagagccagcaacttccac
taccatgagctgaagcccatcgtgttcgtgggctcactggagtacctgaagagagagtgg
gaaacactgcacaacttccccaaagtctccatcctgcccggaactcctctgagtcgggct
gatctgagagcagtgaacattaatctgtgtgatatgtgtgtaatcctctccgccaaccag
aacaacatcgacgacgcgtctctgcaggataaggagtgtattctggcgtcactcaacatc
aagtccatgcagtttgacgacagcatcggcctcctgcaggccaactctcaaggcttcact
cctccaggaatggatcgctcgtctccagaaaacagtcctgttcacgggttggtgcggcag
gcgtcgataaccacaggagcaaacattcccatcatcactgaactcgtgaacgactcgaat
gtgcagtttctggatcaggatgatgatgatgatcccgacactgagctgtacctcactcaa
cccttcgcctgcgggaccgccttcgccgtcagcgtgctggactcattgatgagtgctacg
tacttcaatgataatatcctgacgctgatccgcacgctggtgacgggtggagcgacgccg
gagctggagggtctgctggcggaggagaacgctctgcgtggaggatacagcacaccacag
accctcgccaatcgagaccgctgccgagtcgcccagctggcgctttacgacggacccttc
gccgacctcggggacggtggctgttacggtgatttattctgtaaagcgttgaagacgtat
aacatgctgtgtttcggcatctaccggctgagagacgctcatctgaccgcagcgagcctc
tgcaccaaacgctacgtgatcacgaacccgccgtatgagtttgatctggttcccacagat
ctgatcttctgtctgatgcagtttgatcataacgcgggtcagagtcgcagtaatctgaac
actcagagcagcttctgtcctgtgcgcagagcatcccgcagccgctgcaccccccgcgac
aagcagaagtacgtccctctgtag
DBGET
integrated database retrieval system
