Danio rerio (zebrafish): 799016
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Entry
799016 CDS
T01004
Symbol
pop1
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
dre
Danio rerio (zebrafish)
Pathway
dre03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dre00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
799016 (pop1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dre03009
]
799016 (pop1)
03016 Transfer RNA biogenesis [BR:
dre03016
]
799016 (pop1)
03029 Mitochondrial biogenesis [BR:
dre03029
]
799016 (pop1)
Enzymes [BR:
dre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
799016 (pop1)
Ribosome biogenesis [BR:
dre03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
799016 (pop1)
Transfer RNA biogenesis [BR:
dre03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
799016 (pop1)
Mitochondrial biogenesis [BR:
dre03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
799016 (pop1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POPLD
POP1_N
Motif
Other DBs
NCBI-GeneID:
799016
NCBI-ProteinID:
XP_021322462
ZFIN:
ZDB-GENE-120911-1
UniProt:
A0A8M9NZG1
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All DBs
Position
16:54674327..54687178
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AA seq
777 aa
AA seq
DB search
MPGAKERMREKKMKNQPRSVQYSSRGQGSQASGWVRGHQAEGHRYSQDLPKHITASFFAG
ARAAEVSVMLKAVSKPTGSCQVFTALPKHMRRRAMSHNTHRLPLRLRDAALRLAERSQRG
PEKPPQAKSRSRRARRRHTHLLLEFNRRQRRSRWLETHIWHAKRFHMQNSWSYRLPHTPT
AKSYRASYRAMDTHTLLQDLSYFCCLELQGPEEQILRALSQLTSKQTGPTFAASVCLSGA
RVGRLLLYRAGQYPHGALGPVEFLWRPRAPECTHRQLWIWIHPALKQDVLPELQAVCQCC
ESVCEVSASSSAAAVDELRNRKRKCTADAAELPAKRLLGDGTRAVGDPVRWESADTHITI
SDLTMEIVRFRLIGPLAHLVLTDTLHAANEEALRGVCVDADLHQQQRDVFTQLRGVCSTA
ELPAGCVLGLTVSDPRLTLPQRRGKTVPDLQHISTESSHARDLTLRGVPAHCSQSALWDT
SVRDHVTDSRLSEQELNRVRSDVLVPGSAVCVSGVCAVPLLLLHQPGRVCGQERLRWGSG
WDLLLPKGWHACVCQELNRVRSDVLVPGSAVCVSGVCAVPLLLLHQPGRVCGQERLRWGS
GWDLLLPKGWAMAFWVPLVYRGVRVGGLHMSVKHAQFMAQPHFPHDYPDCPAGERCQSEQ
EAELLEKFKRRPPSKRTNYVKHGCVAPFRCPWQQLVDEWAELVELGGETQSRAGPVQFTV
LRSVSVLRQLSAWCSSASAVTPAAAAALHQEQQGALLWVRLRLLGKGRPELHAWAGV
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgccgggagcaaaggagcgaatgagagagaagaagatgaagaatcagccgaggagtgtt
cagtacagcagcagaggtcaggggtcacaggcgtccggctgggtcagaggtcatcaggcg
gagggtcacagatacagtcaggacctgcccaaacacatcacagcgtcgttcttcgctgga
gcgcgcgcagctgaggtcagtgtgatgctgaaggcggtcagtaaacccacgggcagctgt
caggtgttcactgcgctgcccaaacacatgcggagacgcgccatgagccacaacacacac
cgactgcccctgcggctgcgagacgccgcgctcagactggcggagcgcagtcagcgtggc
cccgagaagcctccacaggcgaagagccgcagccgccgcgcacgccgccgacacacacac
ctgctgctggagttcaaccgcagacagaggaggagccgctggctggagacgcacatctgg
cacgccaaacgcttccacatgcagaacagctggagctacagactgccacacacacccact
gccaagagctacagagccagctacagggccatggacacacacacactgctgcaggatttg
tcatatttctgctgtttggagcttcaaggacctgaagagcagatactgagagcgctttcc
caactcaccagcaagcagacaggccccacgtttgcagcgagtgtgtgtctgtccggtgcg
cgtgtgggccggctcctcctctacagagcgggtcagtatcctcacggtgctctgggtccg
gttgagttcctgtggaggccccgggcccctgagtgcacacacagacagctgtggatctgg
atacacccggccctcaaacaggacgtgctgccggagctgcaggcggtgtgtcagtgctgt
gagagtgtgtgtgaggtctctgcttcctcttctgctgctgctgtggatgagctgaggaac
aggaagaggaagtgcactgcagacgctgctgaacttcctgctaagcggctgctgggggac
gggacgcgtgcagtcggggatcctgtgcgctgggagtctgccgacacacacatcaccatc
agtgacctcaccatggagatcgtgcgctttcgtctgattggtcctctggcccacctggtg
cttacagacacgcttcatgcagccaatgaggaggcgctgagaggagtgtgtgtggacgca
gatctccatcagcagcagagggacgtgttcacacagctcagaggtgtgtgttcaacagca
gagctcccagcaggctgtgtgttggggctgactgtcagtgaccccagactcaccttacct
cagagacgcggtaaaactgtgccggacctgcagcacatcagcacagagtcttctcatgcc
agagatctgacactcagaggagttcccgctcactgcagtcagagtgcattgtgggataca
tctgttcgtgatcatgtgacagacagccgattgtctgagcaggagttgaaccgcgtgcgc
agtgatgtgctggtgccgggctctgcagtgtgtgtgtcgggtgtgtgtgcggtgccgctg
ctgctcctccatcagccgggtcgtgtgtgtggacaggagcgtctgcgctggggctccggc
tgggacctgctgctgcccaagggctggcatgcttgtgtgtgtcaggagttgaaccgcgtg
cgcagtgatgtgctggtgccgggctctgcagtgtgtgtgtcgggtgtgtgtgcggtgccg
ctgctgctcctccatcagccgggtcgtgtgtgtggacaggagcgtctgcgctggggctcc
ggctgggacctgctgctgcccaagggctgggccatggccttctgggtgcctctggtgtat
cgtggtgtgcgtgtcggtggtctccacatgagtgttaaacacgctcagttcatggctcag
ccgcacttccctcacgattacccagactgccctgcaggagagcgctgtcaatcagagcag
gaggcggagcttctggagaagtttaaaaggcgtcctccctccaaacgcacaaactacgtc
aaacacggctgtgtggcgccgttccgttgcccatggcaacagctggtggatgagtgggcg
gagcttgtggagctgggcggagaaacacagagcagagccggcccagtgcagttcactgtt
ctcaggagtgtgtcggtgctgcggcagctgtctgcgtggtgttcgtctgcatctgcggtg
acccctgcggcggctgcagcgctgcatcaggagcagcagggggcgctgctgtgggtgagg
ctgcggctgctgggtaagggccgcccggagctgcacgcatgggccggtgtatga
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