KEGG   Dehalobacter restrictus: DEHRE_05395Help
Entry
DEHRE_05395       CDS       T02996                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
drs  Dehalobacter restrictus
Pathway
drs03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:drs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    DEHRE_05395
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:drs03400]
    DEHRE_05395
Enzymes [BR:drs01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     DEHRE_05395
DNA repair and recombination proteins [BR:drs03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     DEHRE_05395
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID: AHF09587
LinkDB All DBs
Position
complement(1080257..1081198)
Genome map
AA seq 313 aa AA seqDB search
MKLLEVMEPVLSSEIRTGDAWIHQIKWDGIRGLSYIEDGSVQIYTKSGRERTSFYPEIQI
APKLLNGHQAVLDGELVVFNTGNRPSFHLIMNRERLRNSSNLPVYQQKYPVCYILFDLLF
FNGTDLRNRPLEERQDLLRTKVSSSSNITVTDDFTDGSALFKLMKERNYEGIVSKRKNSR
YQAGKKHNDWFKTKISKKILAIVGGLSWKEQFPNSLLLGIFQGDQYLYIGNASLGLAQKD
FQLLKAYASDYTQESSPFDNLKKMKDTTWLKPVLTCWVSFLEWTDSRSLRHPKIIGFSKD
PASEAQGKEFITE
NT seq 942 nt NT seq  +upstreamnt  +downstreamnt
atgaaactgctggaagtaatggagcctgtgctgtcatctgaaatcaggacaggtgatgcg
tggatccaccagattaaatgggacggtatcagagggttatcctatattgaagacggcagc
gtccagatctacaccaaaagtggcagggagcgaacttctttctatcctgaaatccagata
gctccaaaactgctgaacggccatcaggccgtactggatggtgaactggttgttttcaat
accgggaacagaccatcctttcatctgatcatgaatcgggaacgcctcagaaacagttct
aatctgcccgtctatcagcaaaaatacccggtctgctacatcttgtttgatcttttgttc
tttaatggcacagacttgcgtaaccgtcctctagaagagagacaagatcttcttcggacc
aaggtgtcatcttcttccaacatcacggttaccgatgattttacggacggttcagctctg
tttaagctaatgaaagaaagaaattacgagggaatcgttagcaagagaaagaacagccgt
taccaagctggcaaaaaacataatgactggttcaaaaccaaaatcagcaaaaaaatcctg
gccattgtcggcggattatcctggaaagagcaatttccaaactcactgctgcttggtatc
ttccagggagaccagtacctctacatcgggaatgcgagtcttggactggcccagaaagac
ttccagcttctcaaggcttacgcttcggattatacccaggaaagcagcccgttcgacaac
cttaaaaaaatgaaggatacgacctggctcaaaccggtcttgacctgctgggtaagtttc
ctggaatggacagacagcaggagtctccgccaccctaaaattattggtttcagcaaagat
cctgcctctgaagcccaaggaaaggaattcatcacggaatga

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