Desulforamulus ruminis: Desru_2493
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Entry
Desru_2493 CDS
T01518
Name
(GenBank) Serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
dru
Desulforamulus ruminis
Pathway
dru00550
Peptidoglycan biosynthesis
dru01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dru00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Desru_2493
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dru01002
]
Desru_2493
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dru01011
]
Desru_2493
Enzymes [BR:
dru01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Desru_2493
Peptidases and inhibitors [BR:
dru01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
Desru_2493
Peptidoglycan biosynthesis and degradation proteins [BR:
dru01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Desru_2493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
AEG60724
UniProt:
F6DP05
LinkDB
All DBs
Position
complement(2537988..2539148)
Genome browser
AA seq
386 aa
AA seq
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MKYKRFILFFLFCLTLSYACPAAGEPEKGVPKVKASAVCLMDVTTGQIYFEKEGNKRREP
ASLTKIMTAILAIENGNLKDIVTVGKRAASVSMGQDIGLRTGDRLYLEDLLKAALLYSAN
DSTVAIGEHIGGSHEVFIKMMNDKAKALGMKNTSFANTNGYHHPNHYTTANDLAILTCYA
LKNPTFAELVRTKEVTITWLPPEDNGTTDEKPEEKVVREKILHSTNRLLESDFEGINGVK
TGTTPRAGNCLIASATREGRQLVAVILNSQNRWDDATGLLDYGFNDIKPVALVEKSEYVD
KVPVEEGVEKEVRLVAANKVEVYLPPGELELVQKKIHKTVAPKAPITKGTKLGTVTYLLK
DKEIASVDLVANQDIERLPWYRRIFE
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaaatataaacggtttatcctattttttttattttgcttaacccttagctacgcctgt
cccgcagccggggaaccggagaaaggcgtaccaaaggtcaaggcttcggctgtttgcctg
atggatgtaacaacgggacaaatttattttgaaaaagaaggcaataaaagaagagagccg
gccagtttaaccaaaatcatgaccgcgatcctggccattgaaaacggcaaccttaaggat
atcgtaacagtgggaaaacgggctgcctctgtttccatggggcaggatatcgggctgcgc
acgggagaccgcttatacctggaagatttactaaaggcggcattactgtattccgccaat
gattccacggtggccattggagagcatattggcggcagccatgaagtgtttattaagatg
atgaacgataaagccaaggcgctgggcatgaaaaataccagctttgccaataccaatggc
tatcatcacccgaatcactatacaacggccaatgatttagccatcctaacctgctatgct
ttaaagaatccaacctttgcagaattggtgaggaccaaagaagtaaccatcacctggctg
cctcctgaagacaacggcacaaccgatgaaaaacctgaagagaaggttgtccgggaaaaa
attcttcacagcaccaaccgtttattggagtccgattttgaaggcattaatggagtaaaa
accggtacaaccccccgggcggggaactgcctgatcgcttcagcgacccgggagggccgg
caactggtggccgttattctaaacagccagaatcgctgggatgatgcaaccggattgctg
gattatggttttaacgacattaagccggtagcgctggtggaaaagagtgaatatgtggat
aaagtgccggtggaggaaggagtagagaaagaagttcgtctggtggctgccaacaaggtg
gaagtttatttaccgccaggggaactggagctggtgcaaaagaaaattcataagacggtc
gcgccaaaggctcccattaccaagggaacaaaattaggaacggttacgtatctgcttaaa
gataaagaaattgcttctgttgatttagttgccaatcaggatattgaacgtctcccgtgg
taccggcgcatttttgagtaa
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