KEGG   Desulfolutivibrio sulfodismutans: GD606_15985
Entry
GD606_15985       CDS       T06784                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Organism
dsd  Desulfolutivibrio sulfodismutans
Pathway
dsd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dsd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GD606_15985
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dsd03019]
    GD606_15985
Enzymes [BR:dsd01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     GD606_15985
Messenger RNA biogenesis [BR:dsd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     GD606_15985
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 Flavi_DEAD AAA_22 P-loop_SecA GREB1_2nd
Other DBs
NCBI-ProteinID: QLA13656
LinkDB
Position
complement(3533553..3534836)
AA seq 427 aa
MSFASFELHPLLLSNIESLGYTAPTPIQTEAIPPVMEGRDVMGLAQTGTGKTAAFLLPIL
NRLARRQPPKRRAIKALIVAPTRELAEQIHDAVRELGHRVGVKSLTVYGGVGMSPQIQGL
RRGVDIVVACPGRLLDHMRQGHVDFSALDTLVLDEADHMFDMGFLPDIRAILEKLPAKRQ
TLLFSATMPGSIRALADDILTEPVTVRIGNQAPAATVEHAVYPVTPSRKTPLLMELLTQA
KSESVIVFTRTKHKAKGLAELLCKSGCRAACIQGNLSQRQRQAALDGFKAGTYRVLVATD
IAARGIDVSKVGHVINFDIPDTPDAYTHRIGRTGRAECQGQAHTLITREDMSMVRAIEHA
MGKPLPRRELEGFAPTPQEYRAQPSESRETYNRNRRPGGGYGNGRGHSRPAGQKPAYRPA
ARREAQA
NT seq 1284 nt   +upstreamnt  +downstreamnt
ttgagctttgcctctttcgaactgcatcccctgcttttgtccaacatcgaatccctgggc
tacaccgcccccacccccatccagaccgaggccatcccgccggtcatggaaggccgcgac
gtcatgggcctggcccagaccggaaccggcaagaccgccgcgttccttttgcccatctta
aaccgcctggcccgccgccagccccccaagcgccgcgccatcaaggccctcatcgtcgcc
cccacccgcgaactggccgagcagatccacgacgccgtgcgtgaactgggccaccgcgtg
ggcgtcaaaagcctcacggtctacggcggcgtgggcatgagcccccagatccagggcctg
cgccgtggcgtggatatcgtcgtggcctgccccggacgcctcctcgaccacatgcgccag
ggccacgtggatttctccgccctggacacccttgtcctggacgaggccgaccacatgttc
gacatgggctttctccccgacatccgcgccatcctggaaaaactcccggccaaacgccag
accctgctcttctccgccaccatgcccggcagcatccgcgccctggccgacgacatcctg
accgagccggtcaccgtgcgcatcggcaaccaggccccggccgcaaccgtggagcacgcc
gtctacccggtcaccccgagccgcaaaaccccgctgctcatggagcttttgacccaggcc
aagtccgagtcggtcatcgtcttcacccgcaccaagcacaaggccaagggactggccgaa
ctgctgtgcaagtccggctgccgcgccgcctgcatccaaggcaacctgtcccagcgccaa
cgccaggccgccctcgacggcttcaaggccggaacctaccgcgtcctggtggccacggac
atcgccgcccggggcatcgacgtctccaaggtcggacacgtcatcaacttcgacatcccc
gacacccccgacgcctacacccaccgcatcggccgcaccggccgcgccgaatgccagggc
caggcccataccctgatcacccgcgaagacatgtccatggtccgggccatcgaacacgcc
atgggcaaacccctgccccgccgcgaactcgaaggcttcgcgcccacgccgcaggaatac
cgcgcccagccctccgagtcgcgcgaaacctacaaccgcaaccgccgccccggcggcgga
tacggcaacggacgcggccacagccgcccggccggtcagaaacctgcctaccgcccggca
gcgcgccgcgaggcccaggcgtaa

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