Desulfolutivibrio sulfodismutans: GD606_15985
Help
Entry
GD606_15985 CDS
T06784
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
3.6.4.13
]
Organism
dsd
Desulfolutivibrio sulfodismutans
Pathway
dsd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GD606_15985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsd03019
]
GD606_15985
Enzymes [BR:
dsd01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.13 RNA helicase
GD606_15985
Messenger RNA biogenesis [BR:
dsd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GD606_15985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Flavi_DEAD
AAA_22
P-loop_SecA
GREB1_2nd
Motif
Other DBs
NCBI-ProteinID:
QLA13656
LinkDB
All DBs
Position
complement(3533553..3534836)
Genome browser
AA seq
427 aa
AA seq
DB search
MSFASFELHPLLLSNIESLGYTAPTPIQTEAIPPVMEGRDVMGLAQTGTGKTAAFLLPIL
NRLARRQPPKRRAIKALIVAPTRELAEQIHDAVRELGHRVGVKSLTVYGGVGMSPQIQGL
RRGVDIVVACPGRLLDHMRQGHVDFSALDTLVLDEADHMFDMGFLPDIRAILEKLPAKRQ
TLLFSATMPGSIRALADDILTEPVTVRIGNQAPAATVEHAVYPVTPSRKTPLLMELLTQA
KSESVIVFTRTKHKAKGLAELLCKSGCRAACIQGNLSQRQRQAALDGFKAGTYRVLVATD
IAARGIDVSKVGHVINFDIPDTPDAYTHRIGRTGRAECQGQAHTLITREDMSMVRAIEHA
MGKPLPRRELEGFAPTPQEYRAQPSESRETYNRNRRPGGGYGNGRGHSRPAGQKPAYRPA
ARREAQA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
ttgagctttgcctctttcgaactgcatcccctgcttttgtccaacatcgaatccctgggc
tacaccgcccccacccccatccagaccgaggccatcccgccggtcatggaaggccgcgac
gtcatgggcctggcccagaccggaaccggcaagaccgccgcgttccttttgcccatctta
aaccgcctggcccgccgccagccccccaagcgccgcgccatcaaggccctcatcgtcgcc
cccacccgcgaactggccgagcagatccacgacgccgtgcgtgaactgggccaccgcgtg
ggcgtcaaaagcctcacggtctacggcggcgtgggcatgagcccccagatccagggcctg
cgccgtggcgtggatatcgtcgtggcctgccccggacgcctcctcgaccacatgcgccag
ggccacgtggatttctccgccctggacacccttgtcctggacgaggccgaccacatgttc
gacatgggctttctccccgacatccgcgccatcctggaaaaactcccggccaaacgccag
accctgctcttctccgccaccatgcccggcagcatccgcgccctggccgacgacatcctg
accgagccggtcaccgtgcgcatcggcaaccaggccccggccgcaaccgtggagcacgcc
gtctacccggtcaccccgagccgcaaaaccccgctgctcatggagcttttgacccaggcc
aagtccgagtcggtcatcgtcttcacccgcaccaagcacaaggccaagggactggccgaa
ctgctgtgcaagtccggctgccgcgccgcctgcatccaaggcaacctgtcccagcgccaa
cgccaggccgccctcgacggcttcaaggccggaacctaccgcgtcctggtggccacggac
atcgccgcccggggcatcgacgtctccaaggtcggacacgtcatcaacttcgacatcccc
gacacccccgacgcctacacccaccgcatcggccgcaccggccgcgccgaatgccagggc
caggcccataccctgatcacccgcgaagacatgtccatggtccgggccatcgaacacgcc
atgggcaaacccctgccccgccgcgaactcgaaggcttcgcgcccacgccgcaggaatac
cgcgcccagccctccgagtcgcgcgaaacctacaaccgcaaccgccgccccggcggcgga
tacggcaacggacgcggccacagccgcccggccggtcagaaacctgcctaccgcccggca
gcgcgccgcgaggcccaggcgtaa
DBGET
integrated database retrieval system