Dinoroseobacter shibae: Dshi_0718
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Entry
Dshi_0718 CDS
T00612
Symbol
pccB
Name
(GenBank) carboxyl transferase
KO
K01966
propionyl-CoA carboxylase beta chain [EC:
6.4.1.3
2.1.3.15
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh00280
Valine, leucine and isoleucine degradation
dsh00630
Glyoxylate and dicarboxylate metabolism
dsh00640
Propanoate metabolism
dsh01100
Metabolic pathways
dsh01110
Biosynthesis of secondary metabolites
dsh01120
Microbial metabolism in diverse environments
dsh01200
Carbon metabolism
Module
dsh_M00373
Ethylmalonyl pathway
dsh_M00741
Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Dshi_0718 (pccB)
00640 Propanoate metabolism
Dshi_0718 (pccB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Dshi_0718 (pccB)
Enzymes [BR:
dsh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.3 Carboxy- and carbamoyltransferases
2.1.3.15 acetyl-CoA carboxytransferase
Dshi_0718 (pccB)
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.3 propionyl-CoA carboxylase
Dshi_0718 (pccB)
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Motif
Pfam:
Carboxyl_trans
MdcE
OHCU_decarbox
Motif
Other DBs
NCBI-ProteinID:
ABV92463
RoseoBase:
Dshi_0718
UniProt:
A8LQS0
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All DBs
Position
726256..727788
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AA seq
510 aa
AA seq
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MKDIQHELDQRRLDARMGGGEKRIASQHAKGKLTARERIELLLDEGSFEEFDMFITHRCT
DFGMQEQKPAGDGVVTGWGTVNGRQVYVFSQDFTVLGGSVSATHAKKICKIMDMAIENGA
PVIGINDSGGARIQEGVDSLAGYGDVFQRNIEASGVVPQISMIMGPCAGGAVYSPAMTDF
IFMVKDSSYMFVTGPDVVKTVTNEVVTAEELGGASTHTRKSSVADAAFENDVEALAEVRR
LIDFLPLNNREKAPVRPFFDDPARVEESLDTLIPDNPNQPYDMKELITKVADEGDFYEIQ
KDFAGNIITGFIRLEGQTVGVVANQPMVLAGVLDIDSARKAARFVRFCDCFEIPILTLVD
VPGFLPGTGQEYNGVIKHGAKLLFAYGEATVPKVTVITRKAYGGAYVVMSSKHLRGDINY
AWPTAEVAVMGAKGATEIIHRADLGDPEKIAARTAEYEDRFANPFVAAERGFIDEVIMPQ
STRRRVARAFAALRNKRAVKPWKKHDNIPL
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacattcagcacgagctcgaccagcggcgtttggatgcccggatgggcggcggc
gagaaacggatcgccagccagcacgccaagggcaagttgacggcgcgggagcggatcgag
cttctgctggacgagggctctttcgaagagttcgacatgttcatcacccaccgctgcacc
gatttcgggatgcaggagcagaagcccgcgggcgacggcgtggtgaccggctggggcacg
gtgaacgggcggcaggtctatgtcttcagccaggatttcacggttctgggcgggtcggtg
tcggccacccatgccaagaagatctgcaagatcatggatatggcgatcgaaaacggcgcg
ccggtgatcgggatcaacgattccggcggggcgcggatccaggaaggggtcgacagcctc
gcgggctatggcgacgtgttccagcgcaatatcgaggcctcgggcgtggtcccgcagatc
agcatgatcatggggccctgtgcgggtggtgcggtgtacagccccgccatgaccgacttc
atcttcatggtgaaggacagctcctacatgttcgtgaccggcccggacgtggtcaagacc
gtcaccaacgaggtcgtcaccgccgaggaactgggcggcgcgagcacccatacccggaaa
tcctccgtcgccgatgcggccttcgagaatgacgtcgaggcgctggccgaggtccgccgc
ctgatcgacttcctgccgctcaacaaccgcgagaaggcgccggtccggcctttcttcgac
gacccggcgcgggtggaggaaagcctcgacaccctgatccccgacaatcccaaccagccc
tacgacatgaaagagctgatcaccaaggtcgcggacgagggggatttctacgagatccag
aaggatttcgcaggcaacatcatcaccggtttcatccggctggaggggcagaccgtgggc
gtggtggcgaaccagccgatggttctggcgggcgttctggatattgacagtgcgcgcaag
gccgcccggttcgtgcggttctgcgactgtttcgagatcccgatcctgaccttggtggat
gtgcccggcttcctgcctggtaccgggcaggagtataacggcgtcatcaagcacggggcc
aagctgctttttgcctatggcgaggcgacggtgcccaaggtgactgtgatcacgcgcaag
gcctatggcggggcctatgtggtgatgagctccaagcatttgcgcggcgacatcaattac
gcctggccgacggccgaagtcgccgtgatgggggccaagggggcgacggaaatcattcac
cgcgccgatctgggcgaccccgagaagatcgcggcgcggacggcggaatacgaggaccgg
tttgccaacccattcgtggcggccgagcgcggcttcatcgacgaggtgatcatgccccag
tcgacccgccgccgcgtcgcccgggccttcgccgccctgcgcaacaagcgcgcggtcaag
ccgtggaagaagcacgacaacattccgctctga
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