Dinoroseobacter shibae: Dshi_2087
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Entry
Dshi_2087 CDS
T00612
Symbol
valS
Name
(GenBank) valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Dshi_2087 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dsh01007
]
Dshi_2087 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dsh03016
]
Dshi_2087 (valS)
Enzymes [BR:
dsh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
Dshi_2087 (valS)
Amino acid related enzymes [BR:
dsh01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Dshi_2087 (valS)
Transfer RNA biogenesis [BR:
dsh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Dshi_2087 (valS)
Prokaryotic type
Dshi_2087 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
ABV93824
RoseoBase:
Dshi_2087
UniProt:
A8LPX0
LinkDB
All DBs
Position
2209300..2212413
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AA seq
1037 aa
AA seq
DB search
MPMEKTFNAAEAEPRLYARWEAEGCFAAGANASRDETFCVMIPPPNVTGSLHMGHAFNNT
LQDILIRWKRMQGYDTLWQPGTDHAGIATQMVTEREMAANGEPTRAEMGRAKFLARVWEQ
KVKSRGTIIGQLKRIGASCDWSREAFTMGGADGDPEKGNGPNFHDAVIKVFVDMYDKGLI
YRGKRLVNWDPHFETAISDLEVENIETPGHMWHFKYPLAGGETYEYVEKDADGTVTLRET
RDYISIATTRPETMLGDGAVAVHPSDERYAPIVGKLCEIPVGPKEHRRLIPIITDEYPDP
TFGSGAVKITGAHDFNDYQVAKRGGIPMYRLMDTKARMRDDGAPYAKAAAIAMEVAEGTR
TLDEAEADSLNLVPDDLRGLDRFEARKAVVDQITAEGLAVMVPNPAAAASTEEGAAATEE
VPAFLPLVESKPIMQPFGDRSKVVIEPMLTDQWFVDAEQIVGPALDAVRNGTVKILPESG
EKTYYHWLDNIEPWCISRQLWWGHQIPVWYGPRRVEVNGVETLDFDPANAVHFVAHSVDE
ARAKAAGYYALPDADKVIIVRSFPRGTPGSGPTDGRVDPMTDAVAAAQRAEAVPDAIPLV
QDPDVLDTWFSSGLWPIGTLGWPEDTEELRKYFPTSTLVTGQDILFFWVARMMMMQLAVT
GEVPFREVYLHGLVRDAKGKKMSKSVGNVVDPLEIIDEYGADALRFSSAAMASLGGVLKL
DLQRVQGYRNFGTKLWNATRFAEMNEVFTAHTQSAMPPGCTETVNRWIIGETAKVREAVD
TALAEYKFNDAANALYAFVWGKVCDWYVEFAKPLLLDGDDATKAETRAVMAWVLDQCFIL
LHPIMPFITEELWGTTGQRDKMLVHADWPSYGADLVDADADREMNWVISLIESVRSVRAQ
MRVPAGLYVPVVQVALDEAGQRAYANNETLIKRLARIEGITKADTAPKGALTIPVEGGTF
ALPLADIIDVSAEKDRLGKTLAKLQKDLGGLRGRLSNAKFVASAPAEVVEENRERLAAGE
AELATLSAALERLEEVG
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgcccatggaaaaaaccttcaacgccgccgaggccgaaccccgtctctatgcccggtgg
gaggcggagggatgctttgcggccggcgcgaacgcatcgcgggacgagaccttctgcgtg
atgatcccgccgcccaacgtcacgggctctctgcatatggggcacgcgttcaacaacacg
ctccaggacatcctgatccgctggaaacggatgcagggctacgacacgctctggcagccg
ggcacggaccacgcggggatcgccacgcagatggtgaccgagcgcgaaatggccgcgaac
ggcgagccgacccgcgccgagatgggccgcgcgaaattcctcgcccgcgtctgggaacag
aaggtcaaatcccgcggcaccatcatcggccagctcaagcgcatcggcgcctcctgcgac
tggtcgcgcgaagccttcaccatgggcggtgccgacggcgaccccgagaagggcaacggc
ccgaatttccacgacgcggtcatcaaggtcttcgtcgacatgtacgacaagggcctgatc
taccgcggcaagcggctggtgaactgggacccgcatttcgagaccgcgatctccgatctc
gaggtcgagaatatcgagaccccgggtcatatgtggcacttcaaatacccgctcgcaggc
ggcgagacctacgaatatgtcgagaaggacgcggacggcaccgtcaccctgcgcgagacc
cgcgactacatctccatcgccacgacccggcccgaaaccatgctgggcgacggcgcggtc
gcggtgcacccatcggatgaacgttacgcgccaatcgtcggaaagctctgtgaaatccct
gtcggacccaaggaacaccgccgcctgatcccgatcatcaccgatgaatacccggacccg
accttcggctcgggcgcggtgaagatcaccggcgcgcatgacttcaacgactaccaggtc
gccaagcgcggcggcatcccgatgtaccggctgatggacaccaaggcccggatgcgcgat
gacggcgccccctatgccaaggccgccgccatcgccatggaagtcgccgaaggcacccgc
acgctcgacgaggccgaggccgacagcctcaacctggtgcccgacgatctgcgcggactc
gaccggttcgaagcccgcaaggcggtggttgaccagatcaccgccgaaggcctcgccgtc
atggtccccaaccccgccgcagccgcatccaccgaggagggcgcggccgcgaccgaggag
gtcccggccttcctccccctggtcgagtccaaaccgatcatgcagcccttcggcgaccgt
tcgaaagttgtgatcgaaccgatgctcaccgaccagtggttcgtggatgccgagcagatc
gtcggccccgcgctcgacgccgtgcgcaatggcaccgtcaagatcctgcccgaaagcggg
gaaaaaacctattaccactggctcgacaacatcgagccctggtgcatctcccgccagctg
tggtggggccaccagatcccggtctggtacggtccccgccgggtcgaggtgaacggggtc
gaaaccctcgatttcgatcccgccaatgccgtgcatttcgtcgcccactcggtggacgaa
gcccgggccaaggccgcgggctactacgccctgcccgacgccgacaaggtgatcatcgtg
cgctccttcccgcgcggcaccccgggcagcggccccaccgatggccgggtcgatccgatg
accgacgcggtggcggcggcccaacgggccgaagcggtgcccgacgcgatcccgttggtg
caggacccggatgtgctcgacacctggttctcctcggggctctggcccatcggcacgctg
ggctggcccgaggacaccgaggagctgcgcaagtatttccccacctccactctcgtgacc
ggccaggacatcctgttcttctgggtcgcgcggatgatgatgatgcaactggccgtcacc
ggcgaggtgcccttccgcgaggtctacctgcacggcctcgtgcgcgacgccaagggcaag
aagatgtccaaatccgtgggcaacgtggtcgacccgctggagatcatcgacgagtacggt
gcggatgcgctgcgcttctcctcggcggccatggccagcctgggcggcgtgttgaaactc
gacctccaacgggtgcagggctaccgcaatttcggcaccaagctgtggaacgccactcgc
tttgccgagatgaacgaggtcttcaccgcccacacccaatccgccatgccccccggctgc
accgaaaccgtgaaccgctggatcatcggcgagaccgcgaaagtgcgcgaggcggtcgat
accgccctggccgagtacaagttcaacgacgccgccaatgcgctttatgccttcgtctgg
ggcaaggtctgcgactggtacgtggaattcgccaaaccgctcctgctcgatggcgatgac
gccacgaaggcggaaacccgcgccgtcatggcctgggtgctggaccaatgcttcatcctg
ctgcacccgatcatgcccttcatcaccgaagaactctggggcacaaccggacagcgcgac
aagatgctcgtgcatgcggactggccgagttacggggccgacctggtcgacgccgacgcc
gaccgcgaaatgaactgggtgatctcgctgatcgaaagcgtgcgctccgtgcgcgcccag
atgcgggtgcccgcggggctctacgtgcccgtggtgcaggtcgcgctcgatgaggccgga
cagcgcgcctatgccaataacgaaaccctgatcaagcggctcgcccggatcgaaggcatc
accaaggcagacacggctcccaagggcgcgctgaccatcccggtcgaaggcggcaccttc
gccctgcctttggcggacatcatcgacgtcagcgccgaaaaggaccggctgggcaagacc
ctcgccaagctccagaaagacctgggcggtctcagggggcggctgtcgaacgcgaagttc
gtggcctccgccccggccgaagtggtcgaggaaaaccgcgaacgcctcgcggctggcgaa
gccgagcttgccaccctcagcgccgcgctggagcgtctcgaagaagtcggataa
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