Dinoroseobacter shibae: Dshi_3489
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Entry
Dshi_3489 CDS
T00612
Symbol
cca
Name
(GenBank) CCA-adding enzyme
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dshi_3489 (cca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsh03019
]
Dshi_3489 (cca)
Enzymes [BR:
dsh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
Dshi_3489 (cca)
Messenger RNA biogenesis [BR:
dsh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Dshi_3489 (cca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
ABV95222
RoseoBase:
Dshi_3489
UniProt:
A8LPF7
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All DBs
Position
3669395..3670543
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AA seq
382 aa
AA seq
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MSVLASRLSHPGAQHVLGVLTGAGHAAYFVGGTVRNALIGAPVTDFDIATAALPQQVQTL
AEDAGIKVVATGIDHGTLTLVLDKTPFEVTTFRRDVATDGRRATVAFAKDVAEDARRRDF
TMNALYATAAGEVVDPLGGLPDLEARKVRFIDDPEARIREDYLRILRFFRFTAWYGDPAK
GIDAEGLTACAALADGLQTLSTERVTAELLKLLAAPDPAPAVASMGQSGILSRVLPGAAD
TALAPLVHLEPTLDLAPDGLRRLAALGGDAGGLRLSKVQARHLATLRSESGGNDTALHLG
QRLGPETAAEVLALRAASLGQPIPPNARSDIARGAAATFPVRAADLPADLEGPAIGAALG
ILEAAWRASDFRLDREALLARL
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttctcgccagccgactgtcccatccgggcgcgcagcacgtgctgggcgtgctg
accggggcgggccacgcggcctatttcgtgggcggcaccgtgcgcaacgccctgatcggg
gcgccggtcaccgatttcgacatcgccaccgccgccctgccgcagcaggtgcaaaccctg
gccgaggatgcagggatcaaggtcgtggccaccgggatcgaccatggcaccctgaccctc
gtgctcgacaagaccccgttcgaggtcaccaccttccgccgcgatgtcgccaccgatggc
cgccgcgccaccgtggcctttgccaaggacgtggccgaggatgcgcgacgccgcgatttc
accatgaacgcgctctatgccacggcggcgggggaggtggtcgaccccttgggcgggctg
ccggatctcgaggcgcggaaggttcgtttcatcgacgatcccgaggcccggatccgcgag
gattacctgcggatcctgcgcttcttccgcttcaccgcctggtatggcgacccggccaag
gggatcgacgccgaggggctgacggcctgcgcggcccttgccgacggcctgcaaaccctg
tcgacggagcgggtgaccgccgaactgttgaagctgctggccgcccccgatccggccccg
gccgtggcctccatgggccagagcggcatcctctcccgggtgttgccgggggccgccgat
accgcgctggcaccgctcgttcatcttgaaccaacgctcgatcttgcgcccgacggcctc
cgccgccttgccgcgctgggcggggatgcgggcggtctgcgcctctccaaggtacaggcc
cgacatctcgccacgctccggtccgagagcggcggcaatgataccgcgctgcaccttggc
cagcggctcgggcccgagaccgcggcggaggtgctggccttgcgcgccgcatcccttggc
cagccgatcccgccgaatgcccgctccgacatcgcccggggggccgcggcgaccttcccg
gtgcgggcggccgatcttcccgccgatctcgaaggcccggccatcggcgcggccctgggc
atactcgaagcggcctggcgcgcgtcggacttccgcctcgaccgggaggccctgctcgcg
cgcttgtga
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