Dinoroseobacter shibae: Dshi_3795
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Entry
Dshi_3795 CDS
T00612
Name
(GenBank) ABC transporter
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dshi_3795
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsh02000
]
Dshi_3795
Transporters [BR:
dsh02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Dshi_3795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_22
SMC_N
AAA
AAA_16
PRK
AAA_5
DUF87
AAA_21
RNA_helicase
Rad17
AAA_18
SbcC_Walker_B
NACHT
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ABV95525
RoseoBase:
Dshi_3795
UniProt:
A8LTF8
LinkDB
All DBs
Position
pDSHI02:3746..4741
Genome browser
AA seq
331 aa
AA seq
DB search
MTKQDTSGAVLSAHNLVKHFPLGGWGKNRRVVRAVDDVTFEVAPGETLGVVGESGCGKST
TARLLVQLLGADSGEVRFQGHVAGTEMPLKEFRRHVQMVFQDSYASLNPRMSMLDAIAFG
PTVHGVSEAEAQRIARDLLDRVGLDPSRFGPRYPHELSGGQRQRVNIARALAFQPEVIVL
DEAVSALDKSVEAQVLNLLMDLKRERNLTYVFISHDLNVVRHVSDRVMVMYLGEVAEIGP
TAEMYADPRHPYTRALLAAMPSLDPDRRTTEAPLSGDPPNPIDPPSGCRFHTRCAEAFGA
CSAQRPSNLRVGAGHYASCHLNDPKMREAAA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagcaagacacatccggcgcggttctgtcggcgcataacctggtgaagcatttt
cccctgggcggctgggggaagaaccggcgcgtggtgcgcgcggtcgatgacgtgaccttc
gaggtcgccccgggcgagactctgggcgttgtcggcgagagtggctgcggcaagtccacc
acggcgcgattgctggtgcagttgctcggcgccgatagtggcgaggtgcggttccagggc
catgtggccgggacggaaatgcccctgaaagagtttcgccgccatgtgcagatggtgttc
caggacagctatgcctcgctgaacccgcggatgagcatgctggatgccatcgccttcggg
ccgacggtgcacggggtgtccgaggccgaggcgcagcgcatcgcgcgcgacctgctggac
cgggtcgggcttgatccgtcgcgcttcgggccgcgttatccgcatgaattgtcgggcggg
cagcggcagcgggtgaatatcgcgcgggcgctggccttccagccggaggtgatcgtgctc
gatgaggcggtctcggcgctcgacaagtcggtggaggcgcaggttctcaacctgctgatg
gacctcaagcgcgagcggaacctgacctatgtgttcatctcccacgatctgaacgtggtg
cggcacgtgtcggaccgggtaatggtgatgtatctgggcgaggtggccgagatcgggccg
accgccgagatgtatgccgacccgcgccatccttatacccgcgccctgctggcggcgatg
ccgtcgctcgacccggatcggcgcacgaccgaggcgcccctgtcgggcgatcctccgaac
ccgatcgatccgccctcgggctgccggttccatacccgctgcgccgaggcgttcggggcg
tgttccgcccaacggccgtcgaacctgcgcgtgggggcgggacattacgcgtcctgtcac
ctcaacgatcccaagatgcgggaggccgcggcatga
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integrated database retrieval system
