Dactylococcopsis salina: Dacsa_1122
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Entry
Dacsa_1122 CDS
T02378
Name
(GenBank) formamidopyrimidine-DNA glycosylase Fpg
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
dsl
Dactylococcopsis salina
Pathway
dsl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Dacsa_1122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsl03400
]
Dacsa_1122
Enzymes [BR:
dsl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Dacsa_1122
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Dacsa_1122
DNA repair and recombination proteins [BR:
dsl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Dacsa_1122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zinc-ribbons_6
Motif
Other DBs
NCBI-ProteinID:
AFZ49825
UniProt:
K9YU08
LinkDB
All DBs
Position
1126232..1127071
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AA seq
279 aa
AA seq
DB search
MPELPEVETVCRGLNELTQGQVFQGGEVLLKRSIAHPVSIEAFWSGLKNTKIQQWQRRGK
YLLAELSSGGWLGLHLRMSGQLLWVEQSEPLAKHTRVRFFFSEGKELRFIDLRTFGRVWW
VAPDVDLKTVITGLNNLGVEPFSPEFTPTYLGNKLKNRRCAIKTALLDQKVVAGIGNIYA
DETLFLGKISPLREAASLTSSEVEALQQAIISVLSTAIEEGGTTFNSFLNLLGVNGNYMG
RAWVYGREGEVCRECETVIQRCKINGRSSHFCPRCQDVR
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
gtgccggaattaccagaagttgaaaccgtttgtcgtgggttaaatgaattaactcaagga
caagtttttcagggtggggaggtgttactaaaacgtagcatcgcccaccccgtttctatt
gaggcgttttggtcgggattaaaaaatactaaaattcaacaatggcaaagacgaggaaag
tatttgttagccgaactttcttcggggggatggttagggctacatcttcgcatgagtggt
cagttgttatgggtggaacaaagtgaaccgttagcgaaacatacaagggtgcgcttcttt
ttttcggaaggaaaggaacttcgttttattgatttaagaaccttcggtcgcgtgtggtgg
gttgcgccagatgttgatctgaaaacggtgattacaggcttaaataatttaggggttgaa
cctttctcgccagagtttacgccgacttatttggggaataaacttaaaaaccgtcgttgt
gccattaaaacggcgttgctagatcaaaaagtggttgcgggaattggcaatatttacgca
gatgagactttatttttgggtaaaatttcaccgttgcgagaggcggcgagtttaacctct
tcagaagtggaagccttacagcaagcaattatttctgttctcagtacggcaattgaggaa
ggaggaacgacttttaatagttttctcaaccttttaggggtgaatgggaattatatgggg
agagcttgggtttatggtcgagagggagaggtttgtcgtgaatgtgaaacggtgattcaa
cgatgcaaaattaatggacggtcttcccatttttgtccccgttgtcaagatgtgcggtag
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