Dickeya solani IPO 2222: A4U42_05510
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Entry
A4U42_05510 CDS
T04410
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
dso
Dickeya solani IPO 2222
Pathway
dso00470
D-Amino acid metabolism
dso00550
Peptidoglycan biosynthesis
dso01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
A4U42_05510 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
A4U42_05510 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dso01011
]
A4U42_05510 (murD)
Enzymes [BR:
dso01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
A4U42_05510 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
dso01011
]
Precursor biosynthesis
Amino acid ligase
A4U42_05510 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
ANE74831
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Position
complement(1298291..1299604)
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AA seq
437 aa
AA seq
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MDYQGRKVVIIGLGLTGLSCVDFFLARGVVPRVVDTRISPPGLDKLPESVERHLGSLNDE
WLLSADLIVASPGIALATPILCEAAEAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTT
LVGGMAHAAGWAVGVGGNIGVPALELLKQESQLYVLELSSFQLETTYSLHAAAATILNVT
EDHTNRYPLGLQQYRAAKLRIYENAKVCIVNADDALTMPVRGADARCLSFGVDVGDYHLN
RQQGETWLRVKGERVLNTREIKLVGQHNYTNALAALALADAVGIPRSSALTALTTFTGLA
HRFQLALARHDVRWVNDSKATNVGSTEAALSGLHVDGTLHLLLGGDGKSADFSPLLRYLQ
GDRIRLYCFGRDGGQLAALRPEIAEQTETMEQAMRLIASRTQPGDMVLLSPACASLDQFR
SFEQRGDEFARLAEELG
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggactatcagggtagaaaggttgtcattatcgggttagggctgacagggctctcctgt
gttgattttttccttgcacgcggggtagtgccgcgcgtggtggatacccgtatcagtccg
ccgggcctggataaactgcctgagtccgttgagcgtcatctgggcagcctcaatgatgaa
tggctgctgtccgccgatctgatcgtcgccagtccggggatcgcgctggcgacgccgatc
ctgtgcgaagcggcggaagccggtatcgagattgtcggcgatattgaactgttctgccgt
gaagcgcaggcgccgatcgtcgctattaccggttccaacggcaaaagcacggttaccacg
ctggtgggcggaatggcgcacgcggccggttgggccgtcggcgtgggcggcaacattggt
gtaccggcgttggagctgctcaaacaggaaagccagctgtatgtgctggagctgtcgagc
ttccaactggaaaccacctacagcctgcatgccgctgcggccacgattctcaacgtcacc
gaggatcacaccaaccgctacccgctggggttacagcagtaccgcgccgctaaattgcgc
atttatgaaaacgccaaagtctgcattgtgaacgcggacgatgccctgaccatgccggtg
cgcggcgccgacgcgcgttgcctgagtttcggcgtggatgtgggcgattaccacctgaac
cggcagcagggtgaaacctggctgcgggtgaaaggcgagcgggtgctgaatacccgcgaa
attaaactggtcggccagcacaactacaccaatgcgttggctgcgctggcgctggcggac
gccgtgggcattccccgttcgtcggccctgactgcgctgaccacctttaccggcctggcg
caccgtttccagttggcgctggcgcgtcatgacgtgcgctgggtcaatgattccaaggcg
actaacgtcggcagtaccgaggcggcgctgagcgggctgcatgtcgatggcacgctgcat
ctgctgctgggcggcgacggcaaatcagcggatttctctccgttgctgcgttacctgcag
ggagatcgcatccgactgtactgttttggccgtgatggcgggcaattggcggcgctgcgt
ccggaaatcgccgagcagaccgaaaccatggagcaggcgatgcgccttatcgccagccgt
acccagccgggagacatggtgctgctgtcgccggcttgcgccagcctcgatcagttccgc
agtttcgaacagcgtggcgacgagttcgcccgtttggcggaggaactgggataa
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