KEGG   Dickeya solani IPO 2222: A4U42_12225Help
Entry
A4U42_12225       CDS       T04410                                 

Definition
(GenBank) serine-type D-Ala-D-Ala carboxypeptidase
  KO
K07259  serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
Organism
dso  Dickeya solani IPO 2222
Pathway
dso00550  Peptidoglycan biosynthesis
Brite
KEGG Orthology (KO) [BR:dso00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    A4U42_12225
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:dso01002]
    A4U42_12225
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:dso01011]
    A4U42_12225
Enzymes [BR:dso01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     A4U42_12225
   3.4.21  Serine endopeptidases
    3.4.21.-  
     A4U42_12225
Peptidases and inhibitors [BR:dso01002]
 Serine peptidases
  Family S13: D-Ala-D-Ala peptidase C family
   A4U42_12225
Peptidoglycan biosynthesis and degradation proteins [BR:dso01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   A4U42_12225
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Peptidase_S13 Beta-lactamase2 Transpeptidase
Motif
Other DBs
NCBI-ProteinID: ANE76034
LinkDB All DBs
Position
complement(2834715..2836148)
Genome map
AA seq 477 aa AA seqDB search
MRFLSILTGFACAVALQANAAPIDEYTKYLPDGANLALVVQKVGASTPTIDYHSQQMALP
ASTQKVITALAALLQLGPDYRFVTTMESSGTLANGVLRGNLAVRFSGDPSLKRQQIRNMV
QELKKRGIREISGDVLIDTSVFASHDKAPGWPWNDMTQCFSAPPAAAIVDKNCFSISLYS
APKAGDNAFIRVASYYPVQMFSEVRTLPKGSPDAQYCELDVVPGELNRFTVTGCLTQRAE
PLPLAFAIQDGASYAGAIVKDELQQADIRIDGSLRRQSLPGAPGTVLAQTESEPLHELLT
TMLKKSDNMIADTVFRTIGHERFKVPGTWRAGADAVRQILRQKAGIDLGNTIIVDGSGLS
RHNLIAPATMMQVLQYIAQHDNELNYIKMLPLAGYDGTLRYRAGLHEAGLDGKVSAKTGA
LQGVYNLAGFITTASGQRMAFVQYLSGYAVPPEDQKERRIPLVRFESRVYKDIYQNN
NT seq 1434 nt NT seq  +upstreamnt  +downstreamnt
atgcgttttttatcgattctgaccggttttgcctgcgcagttgccctgcaagccaacgct
gcccccattgacgagtacactaagtatttgcccgacggagccaatctggcgctggtggtg
caaaaagtcggcgcatctaccccgactatcgattaccacagccagcagatggcgctgccc
gccagtacgcagaaagtcatcaccgcgctggctgcattgttgcaactggggccggattac
cgtttcgtcaccacgatggaaagcagcggtacactcgccaacggggttttacgcggcaat
ctggcggtacgtttcagcggcgatccatcgctgaaacgacagcagatccgcaacatggta
caggaactgaagaaacggggaattcgtgaaatcagcggtgacgtcctgatcgacacgtcc
gtgttcgccagccacgacaaggcgcccggttggccctggaatgatatgactcagtgtttc
agtgcgccgcccgctgccgcaattgtcgacaaaaactgtttctccatctcactctatagc
gctcccaaggcaggcgataacgcattcatccgcgtcgcgtcctattatccggtgcaaatg
ttcagcgaagttcgcaccctgccgaaagggtcgccggacgcccagtattgcgagttggat
gtagtgcctggcgaactcaaccgctttaccgtcactggttgcctgacacagcgggccgaa
ccgttgccgctggcgttcgccatacaggacggtgccagttacgccggcgcgatagtgaaa
gacgaactgcaacaggcggacatccgcattgacggcagcctgcgccggcaatcgctgcct
ggcgctcccggcaccgtactggcgcaaaccgaatcggagccgttgcatgaattgctgacc
accatgctgaaaaaatcggacaacatgattgccgataccgtatttcgcaccatcgggcat
gagcgtttcaaggttcccggaacctggcgcgccggcgctgacgccgttcgtcagatcctg
cgtcagaaagccggaatcgacctgggcaacaccatcatcgttgatggctcggggttgtcc
agacataacctgatcgcgcctgcaaccatgatgcaggtgctgcagtatatcgctcagcac
gataatgaattgaattacataaagatgctgccactggcgggctatgacgggacattacgc
tatcgtgccggcctgcatgaagccgggcttgatggcaaagtctcagccaaaaccggtgcg
ctgcaaggggtatacaacctggcgggctttatcaccaccgccagcggccagcgaatggcc
tttgtgcagtatctctccggctacgcggttccgccggaagatcagaaagaacgccgaatt
ccgctggttcgctttgaaagccgcgtttacaaagatatataccagaacaattag

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