Dickeya solani IPO 2222: A4U42_19160
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Entry
A4U42_19160 CDS
T04410
Name
(GenBank) ABC transporter permease
KO
K02033
peptide/nickel transport system permease protein
K02034
peptide/nickel transport system permease protein
Organism
dso
Dickeya solani IPO 2222
Pathway
dso02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dso00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A4U42_19160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dso02000
]
A4U42_19160
Transporters [BR:
dso02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
A4U42_19160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ANE77276
LinkDB
All DBs
Position
complement(4455780..4457522)
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AA seq
580 aa
AA seq
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MSDTWFRLPATLRPSLLVMASRLLTALTLIVLIGLLPWLSDADPALSLLRARSSEQEATA
EALDAIRQHLGLAQGPWAFLRNWLTGLLHGDAGLSWVSGKPVLPGMLDAAGVSLTLMLAA
LAVAILLALLLSWPTLQRGLTGDNRRSNGALATAFTAMPEFLLASFLLIVGAVWLKLLPP
YGWQSWQHLTLPALALGIPAGGLLGKLFSDALTTTFSEPWLLTWHMAGFSRRDCLLGVIR
RALPAILPQVSLVLVGLTGGAVAVEKVFAIPGLGRATLGAAAAQDLPALQCGVLILLVIA
ALAGMSSALLRSGLLGHALENGSLSTPASAIKVTRRHYRLPLFIALLLTAIVLTGLPRDP
FASDFARLQPPDWSLPFGADATGRDMLARVAHGALSTLFTALAVTLCCLLLGLLLGLFPR
LLSGPAEVANAMPPVIAGMVVAALYGPSTSGAALAVALVAWAPLAVHTASLVTEITAQPY
IRITPLFGLSRFTCVIRYVIPALIGPVTRHAMLRLPGIALALASLGFLGLGEQPPTPEWG
RILAEGMPYVERAVWTVLPPVFALILLSVLAVSLSQWSRR
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatacgtggtttcggttgcctgcaacactacgaccctcgctgctggtcatggcc
tcacgcctgttgactgccctgaccctcatcgtgctgatcggactgctgccctggttgtct
gacgccgacccggcgctcagtctgctgcgcgcccgttccagcgagcaggaggccacggcg
gaagcgctggatgccattcgtcagcatctggggctggcgcagggaccgtgggcgttctta
aggaactggttaaccggtttattgcacggcgatgccggcctgtcctgggtatccggcaag
ccggtgttgcccggtatgctggacgccgcaggcgtgtcactcacactgatgctggcggca
ttggcggtagcgatcctgctggctctgctgctgagttggccaaccctacaacgcgggttg
accggcgataaccggcgcagtaacggtgcgctagccaccgccttcacagctatgccggag
tttctgctggcgtcgttcctgctgattgtcggcgcggtctggttgaagctgttgccgcct
tatggctggcaatcatggcaacacctgactctgcccgcgctggcgctgggtattccggcg
ggtggcttgctgggtaaactgttcagcgatgcattgaccaccacattcagcgagccctgg
ctgctgacctggcatatggccggcttttcccgtcgtgactgcctgctgggcgtcattcgt
cgtgccctgcccgctattctgccgcaggtcagtctggtgctggtcgggctgaccggaggc
gcggtggcggtggaaaaggtgttcgccattcccggactggggcgggcgacattaggagca
gcggcggctcaggatctaccggcgttgcaatgtggcgtactgattctgctggttatcgcg
gcactcgcggggatgagctcggcgttgttgcgcagcggtctgcttggtcatgcgctggaa
aacggttccctctctacgcctgccagcgctattaaagtgacgcgccgtcattaccgtttg
ccgttgttcatcgcgttgttgctgacagcaatagtgctcaccggcctgccgcgtgatccc
ttcgcttccgactttgcccgcctgcaaccgcctgactggtcattgccgttcggcgctgac
gccacaggccgcgacatgctggcgcgggtcgcgcacggggcgttatctaccctgttcacc
gcactggcggtgacgctctgctgcctgctgctcggcctgctcctcgggctgtttcctcgc
ctgctcagtggcccggccgaagtggccaacgccatgccgccggtgatcgccggcatggtg
gtcgccgcattgtacggtccctctacatcaggcgcagcgcttgccgttgctctggtggcc
tgggcgccgctggcggtgcacaccgcgtcgctggtgaccgaaatcaccgctcaaccgtat
atccgcatcacgccgctatttggcctaagccgcttcacctgcgtcatacgctacgtcatt
ccggcgctgataggaccggtcacccgtcatgccatgctgcgcctgcccggcatcgcgctg
gcgctggcatcgctcggctttctgggattaggcgaacaaccgccgacaccggaatgggga
cgcatactggcggaaggcatgccctatgtcgaacgcgccgtctggacggtgttgccgccc
gttttcgcattgattctgctatcggtactggctgtttcgctcagccaatggtcacgacga
tga
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