KEGG   Desulfitobacterium hafniense Y51: DSY0616Help
Entry
DSY0616           CDS       T00333                                 

Definition
(GenBank) hypothetical protein
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
dsy  Desulfitobacterium hafniense Y51
Pathway
dsy03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:dsy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    DSY0616
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:dsy03400]
    DSY0616
Enzymes [BR:dsy01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     DSY0616
DNA repair and recombination proteins [BR:dsy03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     DSY0616
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: LigD_N DNA_ligase_A_M DNA_ligase_A_C DNA_primase_S mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID: BAE82405
UniProt: Q24ZY7
LinkDB All DBs
Position
709474..711930
Genome map
AA seq 818 aa AA seqDB search
MRSKLNQYNQKRNFTRTLEPEGITEMPQEGLRFVVQHHLARRDHYDLRLEWDGAMLSWAV
PKGPSYNTWDKRLAVQVEDHPLEYRHFEGTIPKGEYGGGVVMLWDEGFWEPYVDVDGGLH
EGMLKFVLKGRRLKGRWALVRMKGKAGDKKDNWLLLKEKDDYVQTADGISQFTTSIRTGR
TMTEIEEGEEEKFTRNPFSSTEVQLAKLVRHLPEGEGWLYELKYDGYRIVAYLEGHRVRL
MTRNGHDYTERFQDVASSLADWAEGRAMILDGEMAITDPEGKTDFQALQNYLKNPRTKNL
TYILFDLLALDGADLRGHPLIHRKETLAALLENAPPNLHYSRHVRGKGEESFRAACEAGM
EGIIGKKADALYSGTRNGDWIKLKCDQRQEFIIVGYTLSQKRISGISSLLLGIYEGRELV
YAGRAGTGLKESDMEELEEKFKDIRRSSAPFKPAPKPRANERITWVEPELVVEVKFADWT
EENLLRQASFKGLRADKNPREIRRERADEEKDDGELQLQPPAPERKSLMKINTNSMIIEG
IKISSPDKVIFTDPEITKVDMIRYYAKVAERMLPYVSRRILSIVRCPKGVAQTCFYKKHP
GPGSQGVVTIPILTSDGTTEDYFYIENPSGLIAEAQMGTLEFHIWGSRVDELEKPDLMVF
DLDPDEGMELGTVRQGVRDLKAILAELSLNSYLKTSGGKGYHVVVPLKPAVSWGVFHDFA
QGVAQVMEQKWPDRYTSNVRKAKRTNRIFIDWIRNGRGATSIAPYSLRARRGAKVSMPIT
WEELDTVAPDGVDMAEALRRIQDSDPWEGFFRNQQRLQ
NT seq 2457 nt NT seq  +upstreamnt  +downstreamnt
atgaggtcaaaactcaatcagtacaaccaaaaaaggaatttcaccagaaccttggagccg
gaggggatcacagaaatgccccaggaggggctgaggtttgtagtgcagcaccatctggcc
cgcagagatcactacgatcttcgtctggaatgggatggagccatgttaagctgggcagtg
cccaaggggccttcctacaatacctgggataagagactggctgtacaggtggaggatcat
cctttggaatacaggcattttgaggggaccattcccaaaggggaatacgggggcggtgtg
gtcatgctctgggatgaaggcttctgggaaccttatgtggatgtggatgggggactccat
gaaggtatgctgaagtttgtactgaagggcagaaggcttaaaggcaggtgggctctggta
cggatgaaagggaaagccggggacaagaaggataactggttgttgcttaaagaaaaagac
gactatgtccaaacagccgacggaatttcccaatttaccaccagcatcaggaccggacgc
accatgacggaaattgaagaaggggaggaggaaaaattcacccgaaaccccttcagcagt
acggaagtgcagcttgccaaattagtccgtcaccttcccgagggtgagggctggctttat
gaattgaagtatgatggctatcggatcgtggcctatcttgaagggcacagggtccggctt
atgaccaggaacggccatgattatacagagcggttccaggatgtggcctcttccctcgct
gattgggctgagggaagggccatgattctggatggggaaatggccattacggatccggag
ggcaagacggactttcaggctttgcagaactatttgaaaaatccccggaccaaaaacctg
acctatatcctctttgatctcctggccctggatggagccgacttgcggggacaccccctg
atccacaggaaggaaaccctggcggccttgctggagaatgctcccccaaaccttcactac
agccggcatgtgaggggaaagggcgaagaaagtttccgggcggcttgtgaagcaggcatg
gaggggattatcggcaaaaaagccgatgccctttacagcggaactaggaacggcgactgg
atcaagctgaaatgtgatcaaaggcaggaattcatcatcgtcggctatactctttcccag
aaaagaatcagtgggatcagctcccttctcctgggtatttacgaaggccgggaattggtc
tatgccggccgggccggtaccggcctgaaggaaagcgacatggaggaacttgaggagaaa
tttaaggacatcaggagaagttcggcgccctttaaacctgctcctaagcccagagccaat
gaacggatcacctgggtggaacctgaactggtggtggaggttaagtttgccgattggacc
gaagagaatctattgaggcaggccagcttcaaaggcttgcgggcggataagaaccccagg
gagatcaggagggagagggcggatgaggaaaaagatgatggggaactgcagcttcagcca
cctgcccctgaaaggaagagcctcatgaaaatcaataccaacagcatgattatcgaagga
atcaagatcagcagtccggacaaggtgatcttcaccgatcctgaaatcaccaaagtggat
atgatccggtattacgccaaggtggcagagcgcatgctgccctatgtaagccgccggatt
ctcagcattgtccgctgtcccaaaggggtagcccagacctgcttttataagaagcatccc
ggccccggcagtcagggagttgtcactattcccattctcaccagtgacggaacaacagaa
gactacttctatattgagaacccttccgggctgatcgccgaagcccaaatgggcactctg
gaatttcacatctgggggagccgtgttgatgagctggagaagcctgatctgatggtcttt
gatctggaccccgacgagggaatggagctgggtacggtgcgccagggtgtgcgggatctg
aaagccatccttgccgagctttccctgaactcctatctcaagaccagcgggggcaaaggg
taccatgtggtggtccccttaaaacccgccgtttcctggggagtctttcatgatttcgcc
caaggcgtcgcccaggtcatggagcagaaatggccggatcgttacacaagcaatgtgcgc
aaggccaagcgcaccaacaggatcttcatcgactggattcgcaacggccggggagccacc
agcattgccccctattccctgagagcaagaaggggagccaaggtatccatgcccatcact
tgggaggagctggatacagtggctcccgacggtgtggatatggcggaggccctgcgcagg
atccaggacagtgatccctgggaaggttttttccggaatcagcagcggcttcagtga

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