Desulfobacula toluolica: TOL2_C03080
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Entry
TOL2_C03080 CDS
T02268
Symbol
uvrD
Name
(GenBank) UvrD: ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dto
Desulfobacula toluolica
Pathway
dto03420
Nucleotide excision repair
dto03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dto00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TOL2_C03080 (uvrD)
03430 Mismatch repair
TOL2_C03080 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dto03400
]
TOL2_C03080 (uvrD)
Enzymes [BR:
dto01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TOL2_C03080 (uvrD)
DNA repair and recombination proteins [BR:
dto03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TOL2_C03080 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
TOL2_C03080 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
Viral_helicase1
AAA_30
AAA_12
ResIII
Adenylsucc_synt
DEAD
Motif
Other DBs
NCBI-ProteinID:
CCK78478
UniProt:
K0NFK0
LinkDB
All DBs
Position
379332..381194
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AA seq
620 aa
AA seq
DB search
MQLSEQQQNAVNHTGSPALVVAGAGSGKTRTLTAKFSHLVNIGHDPKRILAITFTNKAAE
EMKSRLIEMTGLKNHAFEWVRTYHSACLMILKQHCEKAGYKSPIQVFSVYSQGKLVKELC
VKNNVEKKNANKILSAISRAKNFGNPEKYFDLKPGLFSINIKDLYDQYEERLKEMNSVDF
DNILLKARDLLRDHTQIRDYYRKYFSYILVDEYQDTNNLQEDLTNLLLGEHRNLFCVGDD
WQAVYGFRGSNVNHFIGFPEKYKDAKIFRLEENYRSANEIVQAANDLIDHNPDKMEKKCF
SQKKGGVVEIYEFISDSREAEWVAKRIKGLNRQGQGIGFDNIAVVYRTKFCSLLFEKIFR
SYRIPYSLKGAQGFFERMEVLDINSYLSAAFFPGDDVSFERIVNTPKRGIGPAMIKKIAA
MRTETTSLQDAARIMVKDRVLTKKIHENLSMVLEILDEIVDLAPARAMEVVLEKTEYFEY
LKKKVKTTAEFVSKKENIEQLIYTARSKNDLLEYLEDAALIREDKEDDDDQDSSGVSLLT
IHSAKGLEYDTVFIVGCEERLFPHWRSIDAGDNAVFEERRLMYVAMTRAERFLYLTHTSY
RKGEFARRSRFIDQIQECLS
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgcagttatccgaacagcagcagaatgcagtaaatcataccggttccccggcacttgtg
gttgcgggagccggttccggcaaaaccagaaccttgacagctaaattttcccacctggtg
aatattggtcatgatcccaaaagaattttagccatcacctttaccaacaaagccgcagaa
gagatgaaatcccggcttattgagatgacaggcctgaagaatcacgcgtttgaatgggta
agaacctatcattccgcctgtctgatgattttaaaacagcattgtgaaaaagcagggtat
aaatctcccatacaggtgttttcagtctacagccagggaaaactggtcaaagaactgtgt
gtgaaaaacaatgttgaaaaaaaaaatgccaataaaattttatctgctatttccagggca
aaaaattttggcaacccggaaaaatattttgatttaaaaccaggccttttcagcatcaat
attaaagatctgtatgaccagtatgaagagcgtttaaaagagatgaacagcgtggatttt
gataatatccttttaaaggcaagggatcttttaagggatcatacgcaaatccgggactat
tatagaaaatatttttcttatattcttgtggatgaataccaggacaccaacaaccttcag
gaagatttaaccaacctgcttttaggcgaacacaggaatcttttttgtgtgggggatgac
tggcaggctgtttatggtttcaggggttccaatgtgaatcattttatcggatttcctgaa
aaatacaaggacgcaaaaattttcagactggaagaaaattaccggtcagcaaatgaaatt
gtccaggcggcaaatgatttgatcgaccataacccggataaaatggaaaaaaaatgcttt
tcccaaaaaaaaggcggggtggttgaaatttatgaatttatatctgattcgcgtgaagcc
gaatgggttgccaaaaggataaaaggcctaaaccgtcagggccagggaatcggttttgat
aatattgcagtggtctacagaacaaaattttgttccctgctctttgaaaaaattttcagg
tcataccgtataccctatagtttaaaaggggcccagggattttttgaaagaatggaagtt
ctggatatcaactcctatttgagtgctgcattctttcccggcgatgatgtctcgtttgag
cggatagtcaatacccccaaaaggggaatcggacctgcaatgataaaaaaaattgcagcc
atgcgaaccgaaacaacaagccttcaggatgccgccagaattatggtcaaggatcgggtg
ttaaccaagaaaattcatgaaaacctttccatggttcttgagattttagatgaaatagtt
gatcttgcacctgcccgggcaatggaagttgttctggaaaaaaccgaatattttgagtat
cttaagaaaaaagtcaaaacaactgccgagtttgtttcaaaaaaagaaaatattgaacaa
ttgatttatacggcaaggtccaaaaatgatcttctggaatatcttgaggatgcagccttg
atcagggaggataaagaagacgatgacgaccaggattcatcaggcgtatcccttcttacc
attcattcagccaagggactggaatatgataccgtatttattgttgggtgcgaagagcgc
ctgtttccccactggaggtccattgatgcgggggataatgctgttttcgaggaaagacgc
ctgatgtatgttgcaatgacaagggctgaacggtttttatacctgacccatacaagttac
agaaaaggggagtttgcaagaagaagccgttttattgatcagattcaggagtgcttatcc
taa
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