Candidatus Desulfovibrio trichonymphae: RSDT_0046
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Entry
RSDT_0046 CDS
T05578
Symbol
frdB
Name
(GenBank) fumarate reductase subunit B
KO
K00245
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
dtr
Candidatus Desulfovibrio trichonymphae
Pathway
dtr00020
Citrate cycle (TCA cycle)
dtr00190
Oxidative phosphorylation
dtr00620
Pyruvate metabolism
dtr00650
Butanoate metabolism
dtr01100
Metabolic pathways
dtr01110
Biosynthesis of secondary metabolites
dtr01120
Microbial metabolism in diverse environments
dtr01200
Carbon metabolism
dtr02020
Two-component system
Module
dtr_M00150
Fumarate reductase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
dtr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RSDT_0046 (frdB)
00620 Pyruvate metabolism
RSDT_0046 (frdB)
00650 Butanoate metabolism
RSDT_0046 (frdB)
09102 Energy metabolism
00190 Oxidative phosphorylation
RSDT_0046 (frdB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RSDT_0046 (frdB)
Enzymes [BR:
dtr01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RSDT_0046 (frdB)
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_10
Fer4_8
Fer4_17
Fer4_7
Fer4_18
Fer4_16
Fer4
Fer4_9
Fer4_4
Fer4_6
Fer4_2
Fer4_21
Fer2
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
BAV91558
UniProt:
A0A1J1DWS8
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All DBs
Position
complement(60376..61137)
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AA seq
253 aa
AA seq
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MADAKKMLLKILRYEPEHDSTPHFVPYGVPWDDQTSFLDALQYLKDNVCSDLSFRSSCRM
AICGSCGVMINGVPKLACKTFLRHYPDGATVEPLANFPVERDLVVDLTHFLEYIQALKPY
IIGNSRQPKDGPNMQTPEEMSRYHQFALCINCGLCYAACPQFGLNPAFYGPGAITLGHRY
NLDSRDRGQADRMRDINSENGVWACTLVGYCSEVCPKHVDPAAALQQCKVAGALNFVSSV
LHCKKNKEAFHVD
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgcgaaaaaaatgctgctcaagattctgcgttacgagccggaacacgacagc
acgcctcattttgttccctatggagtgccatgggatgatcaaacgtcgtttctggacgct
ctgcaatatctcaaggataacgtctgctctgatttgtcttttcgcagttcctgccgcatg
gccatatgcggctcatgcggcgtgatgatcaacggcgtgcccaaactggcctgcaagact
ttcttgagacactaccccgacggcgcaactgtcgaacctttggccaactttcctgtggaa
cgtgacctggttgttgatctcacgcattttctggaatatatacaagcgctcaaaccgtat
atcatcggcaacagccgtcagccgaaagacggccccaatatgcagactccggaagaaatg
tcccgctatcatcagtttgccctgtgcatcaattgcgggctgtgctatgccgcctgcccg
caattcgggcttaaccccgctttctacgggccgggcgccattacgctcggacaccgttac
aatcttgacagccgggaccgcggacaagccgaccgtatgcgggatataaacagcgaaaat
ggggtctgggcctgcacgcttgtgggctattgttccgaggtctgccccaagcatgtcgat
ccggcggcggcactccagcaatgcaaggttgcgggcgctctgaattttgtgagttctgtc
ctccactgcaagaaaaacaaggaggcatttcatgtcgactaa
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