Candidatus Desulfovibrio trichonymphae: RSDT_1013
Help
Entry
RSDT_1013 CDS
T05578
Symbol
nifJ
Name
(GenBank) pyruvate flavodoxin oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
dtr
Candidatus Desulfovibrio trichonymphae
Pathway
dtr00010
Glycolysis / Gluconeogenesis
dtr00020
Citrate cycle (TCA cycle)
dtr00620
Pyruvate metabolism
dtr00650
Butanoate metabolism
dtr01100
Metabolic pathways
dtr01110
Biosynthesis of secondary metabolites
dtr01120
Microbial metabolism in diverse environments
dtr01200
Carbon metabolism
dtr01210
2-Oxocarboxylic acid metabolism
Module
dtr_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
dtr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
RSDT_1013 (nifJ)
00020 Citrate cycle (TCA cycle)
RSDT_1013 (nifJ)
00620 Pyruvate metabolism
RSDT_1013 (nifJ)
00650 Butanoate metabolism
RSDT_1013 (nifJ)
Enzymes [BR:
dtr01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
RSDT_1013 (nifJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
PFOR_II
EKR
TPP_enzyme_C
Fer4_7
Fer4_16
Fer4_8
Fer4_21
Fer4
Fer4_9
Fer4_2
Fer4_4
Fer4_10
Fer4_6
Motif
Other DBs
NCBI-ProteinID:
BAV92525
UniProt:
A0A1J1DUW7
LinkDB
All DBs
Position
complement(1324465..1327995)
Genome browser
AA seq
1176 aa
AA seq
DB search
MAKMQTMDGNNATAYIAYALSETAAIYPITPSSVMGEVMDEMAAKGQKNLLGQTVLVREM
QSEAGAAGVVHGMLSGGTLTSTFTASQGLLLMIPNMYKIAGEQMPGVFHVAARALASHAL
SIFGDHQDVMACRQTGFAFLCASSVQECIDMALIAHLSAIDSGVPFCHFFDGFRTSHEVQ
KIELIDYEDIKGLVNWDKVADFRSDALNPEHPHIRGTAQNPDIYFQNREAANPYYSAVPA
IVLENMKKVAAITGRKHHLFDYMGHPEADRVVISMGSSCEVLEETVNYLNKFGQRVGLVK
VHLYRPFSAEHLLQAIPAGVATLAVLDRTKEMGAPGEPLYQDICTACLENGEAPKIIGGR
YGLGSKDFTPGMAKAVYDNMLSLAPKNHFTVGIHDDVTNLSLDVEEEIDTMPEGTVQCKF
FGIGADGTVGANKQAVKIIGDNTDMYAQAYFAYDSKKSGGFTVSHLRFGKQPIQSSYLIT
QADYIACHKAAYVTQYEVLDGIKDGGVFVLNSNWSLKDMEKHLPASIKRIIARKKLKFYN
VDAVKVAQEVGLGGRINMIMQTVFFKLAKVIDFQKACDLLKESIKKTYGIKGDKIVNMNI
AAVDKGSDALQEVKYLDSWANAVDEAATTCCCEDEYIRDYIRPILAQRGDKLPVSTMHPA
GFMQPGTAACEKRGVAIDIPEWQSANCIQCCQCSFICPHAAIRPVLASLDELATSPKTFE
TKDAIGKELKGYKFRMQIYPEDCLGCGSCADICPVKEKALVMKPLETQIEAQKTNLDFAD
GFISLKDDLMPRNTLKGSQLQQPLHEFSGACGGCGETPYVKLLTQMFGERMLVANATGCS
SIWGASSPTTPYTTNKNGFGPAWGNSLFEDAAEYGYGIGLAYVQRRARLAMIVQEAVKAD
GVSKDIKPTLQGWLDNKDDSEGSREYGEKIVALLDGLDNQHLASQLWDMEDLFTKKSVWI
FGGDGWGYDIGYGGLDHVLACGDDINVLLMDTEVYSNTGGQSSKATPLGAVAQFAAAGKR
TGKKDLGRMAMTYGYVYVASIAMGADKQQVLKAFREAEAYKGPSLIIAYAPCINHGLRKG
MGKSMEEAKMAVQSGYWPLYRFNPELAKEGKNPFQLDSKEPASPLLDFLEGEVRFSSLEK
INPEASKVLKAELAKSYAERYALYKQLADMPSLSVK
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggctaagatgcaaaccatggacggcaacaacgcgactgcgtacattgcctatgctctc
tctgaaacagcagctatttatcccattacaccctcttccgtcatgggcgaagtcatggat
gaaatggcggcaaaaggtcaaaaaaatcttctggggcaaacggttcttgtgcgcgagatg
cagtctgaggccggcgcggccggcgttgtacacggcatgctgtcaggcggcacactcacc
tcgacttttacggcttcccaaggcttgctgctgatgatccctaatatgtacaagattgcc
ggcgaacagatgcccggcgttttccatgttgcggctcgcgctcttgcttctcatgccctg
tccatcttcggcgatcaccaagatgtcatggcctgtcgccagacaggttttgccttcctc
tgcgcctcgtcagtacaggaatgtattgacatggcgctaattgcacatctttcggccatt
gactccggtgttcccttctgccatttctttgacgggttccgcacttcgcacgaagtgcaa
aaaatagaactcatcgactacgaggatatcaagggcctcgtgaactgggacaaggtggcg
gacttccgctccgacgccctgaacccggagcatccacacattcgcggcacagcccaaaac
cctgatatttatttccaaaatcgtgaagcggccaacccctactacagtgctgtgccggcc
atcgtgctggaaaacatgaaaaaagttgcagccatcaccgggcgcaaacaccatctgttt
gactatatggggcatcctgaggctgaccgcgttgtcatcagcatggggtcatcctgcgaa
gtgcttgaagagacggtcaactatctgaacaaattcggccagcgcgttggccttgtcaaa
gtacatctctatcgtccgttctcggccgaacatcttctgcaggccattccagccggtgtt
gcaacccttgccgtgcttgacaggacgaaagaaatgggcgcgccgggcgaaccgctgtat
caggatatctgtaccgcctgcctggaaaacggcgaggcgccgaaaattataggcggtcgt
tacggattgggctccaaagattttacgcccggcatggcaaaagccgtgtatgacaacatg
ctgagccttgcgccgaaaaatcacttcactgtcggcattcatgatgatgtaaccaacctg
tcacttgatgtggaagaagaaattgacactatgcctgaaggcacagtgcagtgcaaattc
ttcggcatcggcgctgacggcacagtgggcgcgaacaagcaggccgtcaaaatcatcggt
gacaacacagacatgtatgctcaggcatacttcgcttacgactccaaaaagtcaggcgga
tttacagtgtcgcacctgcgtttcggcaaacagccgatacagtcttcctacctgatcacg
caagccgactatatagcctgccacaaagcggcgtatgtaacgcaatacgaggtgctggac
ggcatcaaggacggcggcgtctttgtgctcaattccaactggtcgctcaaggatatggaa
aagcatctgcccgcctccataaaacggattatcgcccgcaaaaagctcaaattttacaat
gtggacgcagtcaaggtagcgcaggaggtcggtcttggcggccgtatcaatatgattatg
cagacggtcttcttcaagcttgccaaggttattgactttcagaaagcctgcgacctgctc
aaggaatccatcaaaaagacttatggtattaagggcgacaagatcgtcaatatgaacatt
gccgctgttgacaaaggatcggacgccctgcaggaagtcaagtacctagattcctgggca
aatgccgttgacgaggcggcaacaacctgttgctgtgaagacgaatacatccgcgactat
atccgtcccattctggcgcaacgcggcgacaagctgcctgtctcaaccatgcacccggcc
ggctttatgcagccaggcacagcggcatgcgaaaaacgtggcgttgccattgacatcccc
gaatggcagtcggccaactgcatccaatgctgccaatgctcttttatttgcccgcacgca
gccatccggcccgttctggcttccctcgatgaactggcaacatccccaaaaacctttgaa
acaaaagacgctatcggcaaagaactcaagggctacaaattccgcatgcaaatctaccct
gaagactgcctcggctgcggctcctgcgccgatatttgcccggtcaaagaaaaagcgctt
gtcatgaagccgctcgaaacccaaatagaagcgcaaaaaaccaatcttgattttgctgat
ggctttatctcgctgaaagacgacctcatgccccgcaatacgcttaaaggttcgcagctt
cagcagccgctgcacgaattctccggcgcatgcggcgggtgcggtgaaacgccctatgtc
aaactgctcacccagatgttcggcgaacgcatgttggtggctaacgccacaggttgttcc
tccatctggggagcctcatcgccgacaacgccgtacaccacaaacaaaaacggcttcggc
ccggcctggggcaattcgctctttgaagacgcagccgaatacggttacggcatagggctc
gcgtatgttcagcgtcgcgcgcgccttgccatgattgttcaagaagcagtcaaggcggat
ggtgtttcaaaggatatcaagccaaccttgcaaggctggctcgacaataaagacgattcc
gaaggctcgcgcgaatatggcgaaaaaattgtagcgctcctcgacggtcttgacaaccag
catctggcttcacaactttgggatatggaagacctctttaccaaaaagagcgtctggata
ttcggcggtgacggatggggctatgatatcggatacggtggactggatcatgttctggcc
tgcggcgacgacatcaatgttcttttaatggacactgaagtgtactccaatacaggcggt
caatcgtccaaggcaaccccgctcggcgctgtggcgcaatttgcggccgccggcaagcgt
accggcaaaaaagacctgggccgcatggccatgacttacggttatgtatatgtggcgtca
atcgctatgggtgccgacaaacagcaggtgcttaaggccttccgtgaagctgaggcgtat
aaagggccttcgctgatcattgcctacgcgccttgcatcaatcatggcctgcgaaaaggc
atgggcaagagcatggaagaagcaaaaatggccgtccaaagcggctattggcctctatac
cgctttaacccagaactggcaaaagaaggcaagaatcccttccagcttgattccaaggag
cctgcttctcccttgcttgacttcctggaaggcgaagtgcgtttctcttcccttgaaaaa
ataaatcctgaagcctcaaaagtgttgaaagccgagctggccaagtcgtatgccgaacgg
tatgccctgtacaagcagcttgcggacatgcccagcctctctgtaaaataa
DBGET
integrated database retrieval system
