Duncaniella sp. B8: FDZ78_07515
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Entry
FDZ78_07515 CDS
T05963
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
dun
Duncaniella sp. B8
Pathway
dun00300
Lysine biosynthesis
dun00550
Peptidoglycan biosynthesis
dun01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dun00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FDZ78_07515
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FDZ78_07515
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dun01011
]
FDZ78_07515
Enzymes [BR:
dun01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
FDZ78_07515
Peptidoglycan biosynthesis and degradation proteins [BR:
dun01011
]
Precursor biosynthesis
Amino acid ligase
FDZ78_07515
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
ADH_zinc_N_2
HTH_micro
Motif
Other DBs
NCBI-ProteinID:
QCP72426
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All DBs
Position
1729384..1730856
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AA seq
490 aa
AA seq
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MKKLNELLAPVQTVEIIGSDDKMISGLTSDSRQVTEGTLFVAVPGVSVDGHRFIPMAVEK
GATAVVCQQLPEDLSTHVTYIVVPSSALALGYLASQWWDNPSRKLHLVGVTGTNGKTTTA
TLIYEMARLLGHKAGLLSTVCNYVDDTAYPTDHTTPDPLTINELLHRMVEAGCEYAAMEV
SSHAADQQRIAGLRFEGGIFTNLTRDHLDYHKTFEAYLAAKKKFFDLLPADAFALTNADD
KVGDVMLQNTRARRFTYSLRSEADFRGRIVESRLDGTLLSLNGHEVELLFTGKFNAYNLT
AVYGACILLGWNHDNVLREMSRLVPVAGRFQAFHSPKGYTAIVDYAHTPDAVVNVLNAIR
EVIGRQGEIITVVGAGGNRDKGKRPIMAREAAARSERLILTSDNPRFEEPEEILRDMEEG
LDEEARTRTLHITDRRQAIRTAATLASKGSVILIAGKGHEDYQEIKGVKHHFDDREVVRE
IIASESASGR
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaagctcaacgaactgctcgctccggtgcaaaccgtcgagatcatcggcagtgat
gataaaatgatatcgggtctgacctccgactcccgtcaggtgactgaagggacactcttc
gtggcagtccccggcgtcagcgtcgacggccacaggttcataccgatggccgtggagaaa
ggagccactgcggtggtctgccagcagctccccgaagacctctcgacgcatgtcacctac
atcgtggtcccctcctcggcgctcgccctcggctatctcgcatcgcagtggtgggacaac
ccttcgcgcaaactgcacctcgtaggcgtcaccggcacaaacggcaagacaaccaccgcc
acactcatctatgagatggcgcggctgctcggccacaaggccggactcctctcaaccgtc
tgcaactacgtggacgacaccgcctatcccaccgaccatacaacccctgacccgctgacc
atcaacgaacttctccaccgcatggtggaagccggctgtgaatatgccgcaatggaagtc
agctcacacgccgccgaccagcagcgcattgccggtctgcgcttcgaagggggcatcttc
accaacctcacccgcgaccacctcgactaccacaagactttcgaggcctatctcgccgcc
aagaagaaatttttcgacctgctccccgccgatgccttcgcgctgaccaacgctgacgac
aaggtgggcgacgtaatgcttcagaacacccgcgcacggcgtttcacctactctctgcgc
tccgaggccgacttccgcggacgcatcgtggagtcacgcctcgacggcaccctcctgagc
ctcaacggccacgaggtggaactgcttttcaccggaaaattcaacgcctacaacctcacg
gccgtctacggagcctgcattctgctgggctggaaccacgacaacgtgctccgggagatg
tcgcgcctggtcccggtggccggacgcttccaggccttccattcgcccaagggctacacg
gcgatcgttgactacgcccacacgcctgacgcagtggtcaacgtgctcaacgccatccgc
gaggtcataggccgtcagggcgagatcatcaccgtggtcggagccggcggcaaccgcgac
aagggcaagcgccccatcatggcccgcgaggccgcagcccgcagcgaacgcctcatcctc
acctctgacaatccacgcttcgaggagcctgaagagattctccgcgacatggaggaaggt
cttgacgaggaagcccgcacacgcacactccacatcaccgaccgccgccaggccatccgc
accgccgccaccctcgcctcgaaaggctccgtgatcctcatagccggcaaaggccatgag
gactaccaggagatcaagggcgtcaaacaccatttcgacgaccgcgaggtggtccgcgag
atcatagcctccgaatcagcctccggccgatag
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