Drosophila virilis: 6630987
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Entry
6630987 CDS
T01066
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
dvi
Drosophila virilis
Pathway
dvi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dvi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
6630987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dvi03021
]
6630987
03036 Chromosome and associated proteins [BR:
dvi03036
]
6630987
Transcription machinery [BR:
dvi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
6630987
Chromosome and associated proteins [BR:
dvi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
6630987
PBAF complex
6630987
GBAF(ncBAF) complex
6630987
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
6630987
NCBI-ProteinID:
XP_002053232
FlyBase:
FBgn0210555
UniProt:
B4LXA0
LinkDB
All DBs
Position
Unknown
AA seq
1205 aa
AA seq
DB search
MNTLGPKKDGSPNIEFFQSPETLQGFESIRLWLQKNCKKYLAHSSEPVTKESLAQLLILF
LQYVEAKLGKNSAEPPATRIPMRCFLDFKNGGGLCIIFSTMFRFRAEQRGKKFDFSIGKN
PTRKDPNIQLLIEIEQALVEADLYRIPYIYIRPEIEKSFEARLREILDNRRVEIVTDEED
ATHIVYPVVDPHPDEYARPIFKRGNHVMLHWYYFPESYDSWTLNSFDLPENIPENPESPA
ERWRVAASWILDLEQYNEWMAEEDYEVDEVGKKKTHKQRMSIDDIMSFGDDKKKPTTSSG
SGKQKRRRSPSPTTSTSTSKPGKRKRSPAVIHKKSRNDDDDEDLTRDLDDPPAEPNIQEV
HKATHSALQSTASPAPGGKSRGDNDMMPIKGGTMTDLDDEMTGGSAAQALSTGDGDNSQT
GKTSDNSNTQEFSSSAKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSK
NKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQ
IDADLRPTPMGPPPTSHFHILSDTPSGLQAINPQKTQQPSAAKTLLDLDKKPLGKETGVD
CDKTSGGGLGIKTETLENGAASGLASGVSQFGLKLDQYAKKPAAMKNRTAASMSREWTDQ
ETLLLLEGLEMHKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLGCQPI
PFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPATIMDNHMKNVEKASA
GGKFNPNFGLANSGIAGTGNDKDDDESKEGNNSSSTAGGNDEEMKDINKKDDEAKSKDKT
KSDKLNTNTDSSSTSTTTTTTTTATSNTPTTNNTDKKSKDSSSSSLAGGDKANKIDKMSN
ASNKTASNSSPTETSTNSDVEIKTEDNSGDGETKDGSNDASSGGATAKDGAFSENNMQTA
AAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELEATMEREREGLE
YQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQELQQQGQQVGAAAGAMIMPPQQQQQ
QQQTLPPPHHHQQQQSQQPQPVGAPSAQHQPLPAHIAAGANGAPFPTPPVVPPAAAAPPT
PPGELPAPVAQAQAPTPMETTPPANAAPVAEVASVAAVAPSTAPAPSIPAASVPAVNPPP
PPPSS
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgaacacactcggtcctaaaaaggacggaagtcccaatattgagtttttccaatcgccg
gagacgctgcaaggctttgagtctatacgactatggctacaaaagaattgtaaaaagtac
ttggcgcatagctcagagccagtaacaaaggaatcccttgcacaattgctaatactattt
ctgcaatatgtggaagccaaattgggcaaaaactcggctgaaccgccggcaacgagaatc
ccgatgcgctgttttctggatttcaaaaacggtggaggtctctgcataattttctccacc
atgtttcgttttcgggccgagcaacgtggcaaaaagtttgacttttcaattggaaagaat
cccacccgcaaggatcccaacattcaattgctgatcgagatcgaacaggcccttgtagag
gcagatctctatcgcataccttacatctacataaggccagagattgagaagagctttgag
gcacgtctgcgtgagattcttgacaatcggcgggttgagatcgtcactgatgaagaggat
gccacgcatattgtgtatcctgtggtggatccacatcctgatgaatatgctcgcccaatt
ttcaagcgtggcaatcatgtcatgcttcactggtactactttcctgagtcatatgactct
tggacactgaatagcttcgatttgccggagaatatacccgagaacccagaatcgcctgca
gaacgttggcgggtggctgcatcatggattttagacctggagcagtacaacgagtggatg
gccgaggaagattacgaggtggatgaggtgggaaagaaaaagacgcacaaacagcgcatg
tccatcgatgacattatgtcctttggtgatgacaaaaagaagcccaccacgagcagcggc
agcggcaaacaaaaacgacgtcggtcgccgtcacccacaacctcaacgtctacatcgaag
ccgggaaagcgaaagcggtctccagcggtcattcacaagaaatcgcgcaacgatgacgat
gatgaggatcttacacgggatctcgacgatccgccggctgaacctaacatccaggaagtg
cataaggcaacgcattcggcgctgcaatcgacagccagcccagcacccggtggcaaatca
cgaggtgacaacgatatgatgcctattaaaggtggcaccatgactgatctggacgatgaa
atgactggcggcagtgctgcccaggcgctgtccaccggcgacggcgacaattctcaaacg
ggcaagaccagcgacaacagtaatacccaggaattttcatcctcagccaaggaggacatg
gaggacaatgtgaccgagcagacgcatcacatcattgtgccctcatattcggcctggttt
gactacaactcaattcatgtaatcgaaaagcgcgccatgcccgagttcttcaacagcaag
aacaaatccaagacaccagaaatttatatggcctatcgcaactttatgatagacacctac
agacttaatcccacagagtacttgaccagcacagcgtgtcggcgtaatttggctggggat
gtgtgcgccataatgcgcgtacacgcgttcctggaacaatggggtctcatcaactatcag
attgatgccgacttgcgtcccactcctatggggccgccgccaacctcacactttcacata
ctctcggatacgccatctggtttgcaggcaatcaatccacaaaagacgcaacaaccgtcg
gcggccaagactctgctcgatcttgataagaaaccgctgggtaaggaaactggcgtcgat
tgcgataagaccagcggcggcggcctaggcatcaagacagagacactggagaatggcgcc
gctagtggtttagcctctggggttagccagtttggcctgaaattggatcaatatgccaag
aaaccggcggccatgaaaaatcgtactgcggcgagcatgtcgcgcgagtggaccgaccag
gagacgttgctgctgcttgagggccttgagatgcataaggacgactggaataaggtgtgc
gaacatgtgggtacccgcacccaagacgaatgcattttgcactttttgcgcctgcccatc
gaagatccgtaccttgaagatgatggcggcttcttgggtcctcttggctgtcagccaatt
ccattcagcaagtctggcaatcctattatgtcgacagttgcatttctagcatccgtggtg
gatccgcgtgttgctgctgccgctgcaaaagctgccatggaggaattcgccgccatcaag
gacgaggtgccagcgactattatggacaaccatatgaagaacgtggagaaggcctcagct
ggtggcaaattcaatcccaactttggtctggcaaacagcggcattgccggcactggcaat
gacaaagacgatgacgaatcaaaggagggaaacaatagtagctccacggcaggcggtaac
gatgaggaaatgaaagatattaacaaaaaagacgacgaagccaagtccaaagacaaaacg
aaatcggataagctcaacacaaacacagactcaagttccacatcaacaacaacaactact
actacaacagcaacaagcaacacgcccaccaccaataacacagataaaaaatctaaagat
tcgtcgtcgtcgtcgttggccggcggcgacaaagccaataaaatcgacaaaatgagcaac
gcctcaaacaaaacggcttccaactcctcacccacagaaactagcaccaacagcgatgtt
gagatcaaaacggaagacaacagtggggacggcgagaccaaggatggtagcaacgatgcc
agcagcggtggagctacagccaaggacggggccttcagcgagaacaatatgcaaacagca
gcagccgctgcactggcctcggcggccgtaaaggcgaagcatttggccgcgcttgaggag
cgcaagattaagtcgctggtagcattactggtggagacacaaatgaagaagctggaaatc
aaactacgtcattttgaggagctggaggcaactatggagcgtgaacgcgaaggtcttgaa
taccagagacagcagcttatcacggagcgccagcaattccatctggagcagctgaaagcg
gccgagtttcgagcgcgccagcaggcgcatcatcgcctacaacaggagctacagcaacag
ggacagcaagtgggcgctgctgcgggtgccatgatcatgccaccacaacaacaacaacag
cagcagcagacattaccgccgcctcatcatcaccagcagcaacagtcgcagcagccgcaa
ccggtgggagcgccttcagcgcaacatcagccgttgccggcgcacatagctgcaggtgcc
aatggtgcaccttttccaacgccgccagttgtccctcctgcagccgctgcgccgccaaca
ccgcccggcgagctgcctgcacctgttgcgcaagctcaagcgcctacgccaatggaaact
acaccgccagctaatgcagcacctgttgccgaggtcgccagcgtggcagcagttgcgccc
agtactgcgcctgctccaagcattccagcggcaagcgttccggctgttaatcctcctcct
cctcctccttcatcttaa
DBGET
integrated database retrieval system
