Nitratidesulfovibrio vulgaris Miyazaki F: DvMF_3020
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Entry
DvMF_3020 CDS
T00816
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
Organism
dvm
Nitratidesulfovibrio vulgaris Miyazaki F
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
Response_reg
AAA
HTH_23
MCM
MerR
AAA_16
AAA_3
HTH_17
HTH_28
AAA_19
HTH_Tnp_ISL3
HTH_29
ATPase
HTH_30
AAA_22
Xre-like-HTH
EHN
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ACL09957
UniProt:
B8DJ80
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Position
3810564..3812063
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AA seq
499 aa
AA seq
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MSARRILFLAPATAVTRIFPKLRDAGFEVGIAENLKGASAFIRKSGPAVIFSRPSLPGYK
VDDLLAVGADDPAFPPVIVFAEKGSAEEAERCLSLGARDYWLEPLLFEKVVAALPAQRRA
AAPVPPSSTLGGRTPEQRPGVPRIVGDHPAVRRVLALARQVAPSRATVLISGESGTGKEM
FARFLHGWSDRAEGPFVAVNCAALPEHLLESELFGHEKGSFTGAIARKLGKFELANDGTI
LLDEISEMDLGLQAKLLRVLQESEIDRVGGTETVKVDVRVLATTNRDLDDWVKQGKFRQD
LFFRLNVIPLRLPALRERGDDVVVLARHFAATYVREYGLAAAEFSPEAEEWLQHYDWPGN
VRELQNLMERAVLLAGGRPITTRHFLLDPDTWPLFEEGDLPFGADEAGGAVPAGAGADGA
GDAFGSSGFSADGSQAGGADGGSFPGGVIPLHEMERIMILKGLEVTSGNRTQAAELLGIS
VRTLRNKLNEYRGMGIEVA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcccggcgcatactattcctcgctccggccaccgccgtgacccgaatcttcccc
aagctgcgcgatgcgggattcgaggtcggcatcgccgagaacctcaagggtgcctccgcc
ttcatccgcaagtctggccctgccgtgatcttttcgcggcccagcctgcccggatacaag
gtggacgacctgcttgccgtgggcgcggacgaccccgcgtttccccccgtcatcgtgttt
gccgaaaagggctcggcggaagaggccgaacggtgcctgtcgctgggcgcgcgtgactac
tggcttgaaccgctgctgttcgagaaggtggtggccgcgttgcccgcgcagcgccgcgcc
gccgcgccggtgccgccttcgtccaccctgggcggtcgcacgcccgagcagcgccccggc
gtaccgcgtatcgtgggcgaccaccccgccgtgcgccgcgtgctggccctggcccgccag
gtggcgccctcgcgcgccacggtgctcatttccggagagtcgggcaccggcaaggaaatg
ttcgcgcggttcctgcacggctggagcgaccgggccgaaggccccttcgtggccgtgaac
tgcgccgcgctgccggaacacctgctggaaagcgaactgttcggccacgagaagggatcg
ttcaccggagccattgcccgcaagctgggcaagttcgaactggccaacgacggcacgatc
ctgctggacgaaatttccgagatggaccttggcctgcaagccaagctgctgcgcgtgttg
caggaaagcgagatcgaccgcgtgggcggcaccgagaccgtgaaggtggacgtgcgcgtg
ctggccaccaccaaccgcgacctggacgactgggtgaagcagggcaagttccggcaggac
ctgttctttcgcctgaacgtgatccccctgcgcctgcccgccctgcgcgagcgtggcgac
gacgtggtggtgctggcccggcattttgccgccacctacgtgcgcgagtacggccttgcc
gccgccgagttttcgcccgaggccgaggaatggctgcaacactacgactggccgggcaac
gtgcgcgaattgcagaacctcatggaacgcgcggtgctgctggccggtgggcggcccatc
accacccggcacttcctgctcgaccccgacacctggccgctgttcgaagaaggcgacctg
cccttcggtgccgatgaggccggaggcgccgttccggctggggcgggagcggacggggca
ggcgatgcattcggctcttccgggttttccgccgatggcagccaggctggcggggccgac
ggcggctccttccccggcggggtcattcccctgcacgagatggagcgcatcatgatcctg
aaggggctggaggtcacctccggcaaccgcacccaggcggcggagctgctgggcatctcg
gtgcgcaccctgcgcaacaagctcaacgaataccgcggaatgggcatagaagttgcctga
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