KEGG   Desulfovibrio vulgaris Hildenborough: DVU1885Help
Entry
DVU1885           CDS       T00171                                 

Gene name
gatB
Definition
(RefSeq) aspartyl/glutamyl-tRNA amidotransferase subunit B
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
dvu  Desulfovibrio vulgaris Hildenborough
Pathway
dvu00970  Aminoacyl-tRNA biosynthesis
dvu01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:dvu00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    DVU1885 (gatB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:dvu03029]
    DVU1885 (gatB)
Enzymes [BR:dvu01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     DVU1885 (gatB)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     DVU1885 (gatB)
Mitochondrial biogenesis [BR:dvu03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    DVU1885 (gatB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: GatB_N GatB_Yqey
Motif
Other DBs
NCBI-GeneID: 2793554
NCBI-ProteinID: YP_011102
UniProt: Q72AV5
LinkDB All DBs
Position
complement(1956477..1957907)
Genome map
AA seq 476 aa AA seqDB search
MASYEAVIGLEVHAQLRTRSKLFCSCSTAFGADPNAHVCEVCAGMPGVLPVLNEKAVEFA
ARMGIAVGCTVNRTSVFARKNYFYPDLPKGYQISQYEQPICEHGHLDISVGDAVKRIGIT
RIHLEDDAGKNIHSAGENVSYVDLNRTGVPLIEIVSEPDLRSAEEAVAYLKALRAIVVHL
GICDGNMEEGSFRCDANVSLRPRGAAEFGTRAELKNLNSFRHVQRAIEYEISRQADLLDD
GDKVVQETRLYDSVKNITVSMRGKEEAHDYRYFPDPDLIPIHIDEARLAEWQATLPELPQ
ARLERFMSSFGLSAQDAEVLTAERDHAEFFEAAVKLYDQPRKIANMMLGPLQRELNQRGT
SLAVSAMRPEALAELVRIIDAGLISAKIGNDVFGELFENGAMPEAFVRERGLVQISDTSA
IEQAVDEVIAENPAEVEAYRGGKTKLVSFFVGQVMRKTRGKANPALVNELLASKLG
NT seq 1431 nt NT seq  +upstreamnt  +downstreamnt
atggcctcgtacgaagccgtcatcggtcttgaagtccacgcccagttgcgtacccggtcg
aagctgttctgttcgtgttcgacggccttcggggccgaccccaacgcccatgtctgcgag
gtgtgcgccggtatgcccggtgtgctgcccgtgctcaacgagaaggccgtggagttcgcc
gcacgtatggggattgccgtggggtgcaccgtgaatcgcacctcggtcttcgcccgcaag
aactacttctatcccgacctgcccaaggggtatcagatttcgcagtacgagcagcccatc
tgcgagcatgggcatctcgacatctccgtgggcgacgcggtgaagcgcatcggcatcacg
cgcatccatctcgaggacgacgcgggcaagaacatccactccgcaggcgagaacgtgagc
tacgtcgacctcaaccgtacaggggttccgctcatcgaaatcgtgagcgaacccgacctg
cgaagtgcggaggaggcggtggcctatctcaaggccctgcgtgccatcgtggtgcatctt
ggcatctgcgacggcaacatggaggagggcagcttcaggtgcgacgccaacgtgtcgttg
cgtccgcgtggtgccgccgagttcggtacacgcgccgaactgaagaacctgaactcgttc
aggcatgtgcagcgtgccatcgagtacgagatatcccgtcaggccgacctgctggacgat
ggcgacaaggtcgtgcaggagacgcgcctgtacgacagcgtcaagaacatcaccgtctcc
atgcgtggcaaggaagaggcgcacgactaccgctacttccccgaccccgacctcatcccc
atccacatcgacgaggcgcgtctggccgaatggcaggccacgttgcccgaactgccgcag
gcacggcttgagcggttcatgtcgtcgttcggcctttcggcgcaggatgccgaggtgctc
acggcggaacgtgaccacgccgagttcttcgaggccgccgtgaagctgtacgaccagccc
cgcaagatcgccaacatgatgctcgggccgttgcagcgtgaactcaatcagcgcggcacc
tcgctcgccgtctctgccatgcgtcccgaggcacttgccgaacttgtgcgcatcatcgat
gcggggctcatcagtgccaagataggcaacgacgtgttcggcgaactgttcgagaacggt
gccatgccggaagcgttcgtgcgtgagcgcggtcttgtgcagatttccgatacgtcggcc
atcgaacaggcggtggatgaggtcatcgccgagaatcctgccgaagtcgaagcctacagg
ggcggcaagaccaaactcgtgagcttcttcgtggggcaggtcatgcgcaagacgcgcggc
aaggccaatcctgcgctcgtcaacgaacttcttgcttccaagcttggctag

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