Desulfosarcina widdelii: DSCW_09850
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Entry
DSCW_09850 CDS
T06303
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dwd
Desulfosarcina widdelii
Pathway
dwd03030
DNA replication
dwd03430
Mismatch repair
dwd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dwd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DSCW_09850
03430 Mismatch repair
DSCW_09850
03440 Homologous recombination
DSCW_09850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dwd03032
]
DSCW_09850
03400 DNA repair and recombination proteins [BR:
dwd03400
]
DSCW_09850
Enzymes [BR:
dwd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DSCW_09850
DNA replication proteins [BR:
dwd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DSCW_09850
DNA repair and recombination proteins [BR:
dwd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DSCW_09850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
PAS_4
DEDDh_C
PAS_10
PAS
PAS_9
HisKA
Mob_synth_C
Rv2175c_wHTH
PAS_8
OSCP
Motif
Other DBs
NCBI-ProteinID:
BBO73568
UniProt:
A0A5K7YY76
LinkDB
All DBs
Position
complement(1013744..1015933)
Genome browser
AA seq
729 aa
AA seq
DB search
MKLNNKFWLFAAVCIAFTNAIAVILAVLFWRQISPFERQMLIRLFSEQFWYFFATGVFLF
AAFGFTLDWFFRFYILPLIQMVEETRMMNTVNPAHRLKIDGSREIKELAELINACGDQYE
TAKHVIDQTVESAKAKTEAEKNILATIMAELTQGVLICDTVGRILLYNRQAQRVLDKAQR
PEEDLEAENVEESALPEGFVGLHRSVYSLIDRNLIQYALKEIQRKLDRNKKNVSSHFVVV
TQKRRQLLVETLPILDEDQRFAGFALIFSDITHQLKHTGQLNEHLKNMAKSLRSSIAAIR
STADLMVQFPDMAADQKNDFLGIISEQAEALSRVLRNELTETSIYAKSRWPLAPILVTDF
VAALQDEALLLSDIDLEVAECDSRCMIRVDNYSLMLAIRFVLERLKKEFNQDCSRIRLTA
PGNLVQVDLIWNGPPLKIETLRHWSSLPLTAPQEGLPLTLKEVLEHHHAEIWPHTDSQET
GVGCLRLFIPMVQSERPSEDVRQVAQLLKKRPEFYDFDLFSRTGQAPELEKRLLGELTYT
VFDTETTGLDPRGGDEIISIGAIRVVNGRLLHTETIHQLVDPCRPIPGESIKYHGITDQM
VEGMPTVDKALAFLYRFARDTVLVAHNAAFDMRMLEMKEKATGIRFTNPVLDTMHLSAIV
HPAHEDHSLDTIAQRLGVSLTKRHDALGDAIATGEVFLKIIPLLNEKGIYTLKDALVASQ
RTYYTRLKY
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaacaataaattctggctgttcgcagccgtatgcatcgcttttaccaacgcc
attgcggtgatcctggccgttttgttctggcggcagatcagcccctttgaacgacagatg
ctgatccggttgttcagcgagcaattctggtatttctttgccaccggggttttccttttc
gcggccttcggtttcaccctggattggttcttccgtttttacatcctgccattgattcaa
atggtggaagaaacccgcatgatgaataccgtcaacccggcgcatcgtctcaaaatcgac
ggcagccgggagatcaaggaactggccgaactgatcaacgcctgcggcgaccaatatgaa
acggccaagcatgttatcgaccagaccgttgagtccgcaaaggccaagaccgaggcggaa
aaaaacatactggccaccatcatggccgaactcacccagggcgtgttgatctgcgacacc
gtaggtcgcatccttttgtacaaccgacaggcccagcgggtactggacaaagcccagcgg
ccggaagaggaccttgaggcagaaaatgtagaagagtccgctttgcccgaaggtttcgtc
gggctgcatcgctcggtctattcattgatcgacaggaacctgatccagtatgccctcaaa
gagatccagcgaaagctggaccggaacaaaaaaaacgtctcttcccattttgtcgtggtc
acccaaaaaaggcgccagcttctggtcgagacactgccaattttggacgaggatcagcgt
tttgccggatttgccctgattttctcggacatcacccatcaattgaaacataccggccag
ttgaacgaacatttaaaaaacatggccaaatccctgcgctcttccattgcagcgattcgt
tctaccgcggatttgatggtccagttccccgacatggctgcagatcagaaaaacgacttt
ctgggaattatatccgagcaggccgaagcattgagccgcgtgttgcgaaacgaactgacc
gaaacaagcatttatgccaaatcccgatggccgctggctcccattctggtgaccgatttc
gttgcagcccttcaggatgaagcccttttgctatcggatatcgacctggaggtggccgaa
tgcgattcgcgttgcatgatccgggtggacaactactctttgatgctggccattcggttt
gttctcgaacgcctgaaaaaagagttcaaccaggattgcagtcgaattcggttgactgcg
ccgggcaacctggtacaggtcgacctgatctggaacggaccgccattgaaaatcgaaacc
ttgcgccattggagcagtctgccgctgaccgctccgcaggaagggctcccgctgaccttg
aaagaggtgttggaacaccaccatgcagaaatctggccccataccgacagccaggagaca
ggcgtcggctgtctgcggttgttcattcccatggtccaatcggaaagaccgtccgaggat
gtccgtcaggttgcgcagttgctcaagaaacgaccggagttttacgattttgaccttttc
agccgaaccggccaggcaccggagttggaaaaacggcttttgggtgaattgacctacacc
gttttcgatacggaaaccaccggattggacccgcgcggcggggacgagattatctccatt
ggcgccattcgtgtcgtcaacggccgactgttgcacacggaaaccattcatcaattggtg
gacccttgtcggcccatccccggtgaatcgatcaagtatcacgggattaccgatcagatg
gtcgaaggcatgccgaccgtcgacaaagcacttgcatttttgtatcgcttcgcccgggat
acggttctggtcgctcacaatgcggccttcgacatgcgcatgctggaaatgaaagaaaaa
gccaccggaattcgctttaccaatccggttctggacaccatgcatctttccgccatcgtt
catccggcccatgaagaccattccctggacaccatcgcccaacgactgggagtgagcttg
accaaacgacatgacgccctgggggacgccatcgccaccggtgaagtgtttttaaaaatc
atcccgctgctcaatgaaaaggggatctatacgctcaaagatgcgctggtcgcctcccaa
agaacctactatacccggctcaaatactga
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