Drosophila willistoni: 6645793
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Entry
6645793 CDS
T01067
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
dwi
Drosophila willistoni
Pathway
dwi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dwi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
6645793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dwi03400
]
6645793
DNA repair and recombination proteins [BR:
dwi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
6645793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-GeneID:
6645793
NCBI-ProteinID:
XP_002068471
FlyBase:
FBgn0222485
UniProt:
B4N518
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All DBs
Position
XR
Genome browser
AA seq
1182 aa
AA seq
DB search
MSKKLNTSAGGTSTNTLFNYFSKSPAVDKKKLTPSIKTETEKENLPVPAKRKLGVSDDEN
EKEKEKKTKRKRIIQPESESEEEDFEETKSEEDFSDDGSEYNPDESKGNNEASASEESES
SGEDENEDDMEVDTDEDVDDSPIKPRKKNLNNNNNEPASKRVKLETKVATGGTFQEKLKQ
LQSNAKTDAAYDEMIVTSTTNSNLDEPVVWPHHKLEFLQPDKIKDKAGRRPDHPDYDKST
LHVPEKFLNSLSPGVRQWWVLKSDNYDCVLFFKVGKFYELYHWDADVGVNELGFTYMRGE
FAHSGFPEISFDKMSTILIDRGYKVARVEQTETPDMMTERCKRIKATKFDKVVAREICQI
TDRGTQVFGSQCAIGPNHQPNYMLALVEQDAGTTSKFGICFIDTSMGDFHLGEFEDDKSC
SRLLTLLSHHMPVLLIHERSSLSARTQQILRTVLSGILKEQLPCSGSQVCNAEKTLKLLA
EGYYAQGDTWPVTLRSMQSDMDHLGLTPSDEHKLTLKALGQCIFYIQKCKLEPKVMPMAR
YQLYRPPDEIAPDVKASQASQILKRRSHMVLDATTLSNLRIVGEEHSLLATLDHCCTKMG
KRLLHYWLCAPSCEVNVIEERQVAIGELRQMSELQEMRALLAPMPDFERHLAQIHLFGTK
QVKESQHPDSRAILFEEKLYNKQKLLSFMGILKGFDALTKIPLMFQQCESSLLKRITQLP
SHAEGGLFPDLSSQLRYFAEAFDHEAAAKSGVIAPQPGMDAEYDAVMDRIHAIEDRLKSY
LVEQERHFGCRLAYFGADKKRYQLDVPESHAHKANKSYTLEGQLKGKKRRYTTAETKTLL
KDMQQAEEARNVVLKDLARRVFEKFSNHYEHWKQCIDCVAMLDVLASLAEYANQQLAICV
PQFVSGGDQPFIQLEEGYHPCVNASTYIPNGLELGTENEAALSLLTGPNMGGKSTLMRQM
GLLVIMAQIGSHIPAASCRLSLVDRIFTRLGAQDDILAGHSTFLVELNETSLILKHATCH
SLVLLDELGRGTATYDGTAIAASVVNFLAQLKCRTLFSTHYHNLIDFFQNDKRITLGHMA
CMVENDSDTQDPTQETVTFLYKYTAGACPKSYGFNAAKLAGMPQGIIKRAYALSKKVEAI
ALQRKIMAKMVTATANTKDNDVKKKQLLNLKDLLKQLKLCQV
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaaagctgaacacaagtgccggcggcacgtccacaaatacccttttcaattat
ttcagtaaatcaccggcggtggacaaaaagaaactaacgcccagcattaagacagaaacc
gaaaaagagaatctaccggtgcctgccaagaggaaactaggagtctcggatgacgaaaat
gagaaggagaaagagaagaagaccaaacgtaaacgcattattcaacccgagtcggagagt
gaagaggaagactttgaggaaacgaaatccgaagaagatttctcagatgatggatccgaa
tataatccggatgaaagcaaaggtaataatgaagcttcagcaagtgaggagagcgagagc
agtggcgaggatgaaaacgaagatgatatggaggtggacactgatgaggatgtcgatgat
tcgccgatcaagcccaggaaaaagaatctaaacaataataataatgaacctgcaagcaaa
cgggtgaagttggaaacgaaagttgccaccggcggaactttccaggagaaattgaaacaa
ttacagagtaatgccaaaacagatgccgcctacgatgagatgattgtgaccagtacgacc
aattcaaatctggatgagcctgttgtctggccacatcataagttggaatttttgcaacca
gacaagattaaggataaggctggacgtcgaccagatcatccagattatgacaaaagcaca
ttgcacgtacccgagaaattcttaaactccctctcgcccggtgttcgtcaatggtgggtc
ctcaaatccgataattacgattgcgttctattcttcaaagtgggcaaattctatgagttg
tatcattgggatgccgatgtgggtgttaatgaactcggtttcacctatatgagaggagaa
tttgctcattccggtttcccagagatttcatttgataaaatgtccaccatactgatagac
agaggctacaaggtggcccgtgtggagcagaccgaaacaccggacatgatgactgaacgc
tgtaaacgtataaaggccacgaaatttgataaggttgttgcccgcgagatttgccaaatc
actgatcgcggtactcaggtgtttggctcccaatgcgccattggaccaaatcatcaaccg
aactacatgttggctctggtcgaacaagatgccgggacgacaagtaaatttggcatttgt
ttcattgatacatcaatgggggattttcatttgggtgaatttgaagatgataaaagctgc
tcccgtctactaacgttgctctcgcatcacatgcccgttttgttaatccatgaaagatca
tcactaagtgcacgtacccagcaaattttacgcactgtcttgtcgggaattctgaaagag
caattgccctgctctggttcgcaagtatgcaacgcggagaagacattaaaactcctagct
gaaggctattatgctcagggtgatacttggccggttactttacgttccatgcagtcggac
atggatcatttgggtctcacaccttcggatgaacacaagttgacgctaaaggcattgggt
caatgcattttctacattcaaaaatgcaagctggaacccaaggtaatgcctatggctcgc
tatcagctctacagaccgccagatgagatagcgccagacgtaaaagcttcgcaggcttca
caaattttaaagaggcgctcacatatggttttagatgccaccactctaagcaatctgcga
atcgtgggagaagagcattctctgctagccaccctggatcattgttgcactaaaatgggc
aaacgattgcttcactattggctctgtgctcctagctgtgaggtgaatgtcattgaggaa
cgtcaagtggccattggcgagcttagacaaatgtccgagctgcaggaaatgcgagcttta
ttagcccccatgcctgattttgagcgtcatctggctcagattcatttgtttggcaccaaa
caagtcaaggaatcccaacatcctgattcccgggccatactcttcgaggagaaactatat
aataagcagaaattgttaagttttatgggcatattgaagggtttcgatgccctaaccaag
ataccattgatgttccagcaatgtgagagttcattgctgaagagaattacccaattgcca
agccatgcggaaggtggcctctttccagatctttcgtctcagttgagatactttgccgaa
gcctttgatcacgaggctgcagccaaatcgggtgtaattgcacctcaaccaggaatggat
gcggaatacgatgctgtaatggatcgtattcatgccatcgaggatcgtttaaagtcctat
ctggtggagcaggaacgtcattttggctgccggttggcctactttggtgcagacaagaaa
cgctatcaattggatgtacccgaatcgcatgcccacaaagctaacaaatcctatacactg
gagggccaactgaagggtaaaaagcgtcgctataccacagcggagacgaagaccttgcta
aaggatatgcagcaagcggaggaggcacgtaatgttgtgctcaaggatttggcgagaagg
gtattcgagaaattctcgaatcactatgagcattggaaacaatgcatcgattgtgtggcc
atgttggatgttttggcctctctggccgaatatgccaatcaacagttggccatttgtgtg
ccgcagtttgtttctggtggggatcagccttttatacagctggaagagggctatcatccc
tgtgttaatgcttccacctacatacccaacggtctggaattgggcacagaaaatgaggca
gccctatcgctgcttacaggacccaatatgggtggtaaaagtactttaatgcgacaaatg
ggtcttctggttattatggcacaaattggctcacacataccggccgcaagttgtcgtctc
tccctggtggacagaattttcacgcgtctaggtgctcaagatgatattttggctggccat
agtaccttcttggtggaactcaatgaaacatctctcattctcaagcatgccacttgccat
tccttggtattgctcgatgaattgggacgtggcacggccacatatgatggcactgccata
gccgcatcggtggtcaatttcttggcccaactgaagtgccgtacgctcttctctacgcat
tatcataatttgattgatttctttcaaaacgataaacgtatcactttgggtcacatggcc
tgcatggtggagaatgattccgatacacaggatcccacacaagagacggttacattccta
tataaatatacagctggagcttgtcccaaatcctatggattcaatgcagccaaattggct
ggcatgccccagggcattattaaacgagcttatgctctttcgaaaaaagttgaggccatt
gccttgcagcgcaagattatggccaaaatggtaacagcaactgccaatacaaaggacaat
gatgtcaagaagaagcaattgcttaatctaaaggatttgttaaaacaattgaaattgtgt
caggtttga
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integrated database retrieval system
