Dyella sp. M7H15-1: EO087_00810
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Entry
EO087_00810 CDS
T05846
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
dye
Dyella sp. M7H15-1
Brite
KEGG Orthology (KO) [BR:
dye00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dye03016
]
EO087_00810
Enzymes [BR:
dye01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EO087_00810
Transfer RNA biogenesis [BR:
dye03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EO087_00810
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
DUF6069
Motif
Other DBs
NCBI-ProteinID:
QAU22700
UniProt:
A0A410UEH5
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All DBs
Position
complement(135309..136424)
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AA seq
371 aa
AA seq
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MPLPVQPPLADWIDQRDKLEQWLDAPASGTVLALDTEFMRRNTFYPQLALLQLGLDGRYT
LVDPLAFDIATALQPLESANVITLMHSASEDLETLAPWLPEGPRVLFDTQIAAAFIGMGL
GISYRALVAELAGAELDKGETRSDWMQRPLTASQRAYATLDVVYLHTIHQQLAERLAQRD
RNAWHAEDCARLKRKSCQRLGDQQPQLALRSAAEWPREQQALLRRILLWRDAAARRLDRP
RPWLLEDALTMSLAQQPPKRSDELEQRSSGQRALRSQQRAELLELLAQPVTDEEIATTQA
IPSLPQGKTKQALNAMKEAVNTLAIELDLPAGLLCSRKVLEEYVVTQAWPEALEGWRCGV
LYGRLGSLLPD
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttcctgtgcagccgcccctggcggactggatcgatcaacgcgacaaacttgaa
cagtggctggacgcccccgcatccggcacggtactggcgctagacactgagttcatgcgc
cgaaataccttctatcctcagcttgccttgctgcagcttggcttggatggacgctatacg
ctggtcgatccacttgctttcgacatcgccacggcactgcaaccactcgaaagcgcgaac
gtgatcacactaatgcacagcgccagcgaagatctggaaacgctagcgccctggctgccg
gaaggtccgcgcgtattgttcgacacgcagattgccgcggcattcatcggcatgggcctg
gggatcagctaccgtgcgctggtcgccgaactcgctggcgccgaactcgataagggcgaa
acacgctcggactggatgcagcgaccgctcactgcctcgcaaagggcttacgccacgctg
gacgtggtgtacttgcacaccatccaccaacaactggccgagcgccttgcgcaacgcgac
cgcaacgcgtggcacgcggaagattgcgcgcggctcaagcgcaaaagctgccagcgcttg
ggcgaccagcaaccacaactggccctgcgcagcgccgccgaatggccgcgcgagcaacag
gcattgctgcgccgcatcctgctatggcgcgatgctgccgcacgccgactcgatcgccca
cgcccttggctgctggaagatgcactcaccatgagcctggcccagcaaccgcccaaacgc
tccgacgaactggagcagcgcagcagcggacagcgtgccctacgctcccagcagcgcgcc
gagctgctcgagctgctcgcccaacccgtaacagacgaagaaatcgccaccacccaagcc
atcccttcccttccgcaaggcaagaccaagcaggccctgaatgcgatgaaagaagccgtc
aacaccttggccatcgaacttgacctgcccgccggcctgctctgctcgcgcaaggtgctg
gaggagtacgtggtcacgcaggcatggccggaagccctggaaggatggcgctgcggcgtg
ctttacggtcgcctgggcagcctgttgccggactag
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